Gene Franean1_0799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0799 
Symbol 
ID5669215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp931035 
End bp932474 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content74% 
IMG OID641239727 
Producthypothetical protein 
Protein accessionYP_001505163 
Protein GI158312655 
COG category[R] General function prediction only 
COG ID[COG4310] Uncharacterized protein conserved in bacteria with an aminopeptidase-like domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0295702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACCA CGCCCCTGAG TACCGCGCCC ATGACCACCG CCGGCATCGA CGCGGTCGGG 
CGCCGCCTGC ACGACCTGGT CTCCGCCCTC ATGCCCCCCA TGCGCTCCAT CACCGGCAGC
GGGGTGCGCG CCACCCTGGA CCTCGTGCGC GCGGCGCTGC CCGCGCAGAT CCCGTTCACC
GTGCACGAGG TGCCGTCGGG CACGCCCGTG CTGGACTGGA CGGTCCCGCG GGAGTGGAAC
GTCGCCGGCG CCCGGCTGGT CGGGCCGGAC GGGCGGGTCG TCCTCGACGT CGCCGACAAC
CCCCTGCACC TGCTCGGCTA CAGCACACCC GTGCGCGCGA GGATGCCGCT GCGCGAGCTG
CGCCAGCACC TGTACTCGAT GCCGGACCGG CCCGACTGGG TCCCCTACCG GACGTCCTAC
TACAACGACG CGTGGGGCTT CTGCCTCACC GACCGCCAGC TCGCGGCGCT GCCCGACGGC
GAGTACCAGG TCGAGATCGA CACCTCGCTC ACCGACGGGT CGCTGACCTA CGCCGAGATC
GTGCTGCCGG GGGCCACCGA CGAGGAGTTC CTCGTCACCA CGCACACCTG CCACCCGGCG
ATGGCCAACG ACAACTCCTC CGGCATCGCC GTGGCCGCCG AGCTGGCGTC CGCGCTGGCC
GCGCGGGAGC GCCGGTTCAC CTACCGGCTG CTGTTCATCC CGGGGACGAT CGGCTCGATC
ACCTGGCTGG CCCGCAACCC GGCCGCGGTC GGGCGCATCC GGCACGGCCT GGTGCTCACC
GGCCTCGGTG ACCGCGGCGC GCCGACCTAC AAGCGCAGCC GGCGCGGCGA CGCGGTCGTC
GACCGGGCGG CGACGCGCGC GCTCGCCGAG ACCGGACGTC CGCACCGGGT TGTCGGCTTC
TCGCCCTACG GCTACGACGA GCGCCAGTTC TGCTCGCCCG GCTTCGACCT GCCGGTGGGC
CGGTTCGGCC GCAGCCAGCA CGGCGAGTAC CCGGAGTACC ACACGTCGGC CGACAACATC
GACTTCGTGA CGCCGGAGTC GCTGGGGGAC TCGTTCGCCA TCCTGAACCG GACGATGGAG
ATCTGCGAGG CCGACCGGGT CTGGCGCAAC ACCTCCCCCT ACGGGGAGCC CCAGCTCGGC
CGGCGCGGGC TGTACCGCTC GATCGGCGCG ACGATGAACC GCGCGTCGAT CGAGATGGGC
CTGCTGTGGG TGCTCAACCT CGCGGACGGC ACCCGCACCC TGCTCGACAT CGCCGAGCGG
GCCGAGCTGC CGTTCGACGC GGTCGCCAAC GCCGCGGACG CGCTGGCCGG CGTCGGCCTG
CTCACCGAGG ACGGCCCGGC CGTCGACTCG CCCGACACCG CTCCCATCGC CGCTCCCGCC
ACGGTCGCGC CGCCCGGCAC CGTCGCCGCC GCGCCGGAAC CCGCGGTAGT GATCAGGTGA
 
Protein sequence
MSTTPLSTAP MTTAGIDAVG RRLHDLVSAL MPPMRSITGS GVRATLDLVR AALPAQIPFT 
VHEVPSGTPV LDWTVPREWN VAGARLVGPD GRVVLDVADN PLHLLGYSTP VRARMPLREL
RQHLYSMPDR PDWVPYRTSY YNDAWGFCLT DRQLAALPDG EYQVEIDTSL TDGSLTYAEI
VLPGATDEEF LVTTHTCHPA MANDNSSGIA VAAELASALA ARERRFTYRL LFIPGTIGSI
TWLARNPAAV GRIRHGLVLT GLGDRGAPTY KRSRRGDAVV DRAATRALAE TGRPHRVVGF
SPYGYDERQF CSPGFDLPVG RFGRSQHGEY PEYHTSADNI DFVTPESLGD SFAILNRTME
ICEADRVWRN TSPYGEPQLG RRGLYRSIGA TMNRASIEMG LLWVLNLADG TRTLLDIAER
AELPFDAVAN AADALAGVGL LTEDGPAVDS PDTAPIAAPA TVAPPGTVAA APEPAVVIR