| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0798 |
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| Symbol | |
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| ID | 5669214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 930289 |
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| End bp | 931038 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641239726 |
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| Product | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase |
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| Protein accession | YP_001505162 |
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| Protein GI | 158312654 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0282548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTTCGG CGGAATCGGC TCAACCTGCT CGATCGGCTC CCGGCGGGCC GGCCTGGGCG
ATCGTGCTGG CGGCCGGTGG CGGCACCCGG TTCGGCGGAC CCAAGCAGTT CTCCGACCTG
GGCGGGCTCC CGCTCGTGGC GCATCCCGTC CGGGCGGCCG CGGCCGCCTG CGACGGGGTC
GTCGTGGTGC TCCCCACGCC CCTGCTCGAC CGGTGGGCCC CGCCGGACGG CGTGCGCGCC
ATCGCCGGCG GCGCCACCCG CGCCGAGTCC GTCCGGGCCG GGCTGGCCGC CGTCCCCACC
GAGGCCGAGG TGATCGTGGT GACCGACGCC GCGCACCCGC TGGCCACCGC CGCGCTGTAC
CGCTCGGTCG TCGCGGCGGT GCGTGCGGGC GCGGACGGCG CCGTGCCCGG CCTGCCGCTC
ACCGAGGTTG TCAAGGGGGT CCTGGCCAGC GGCCCGGACC TCGTCACCGG GGCCTCGCTG
GCGCGCGAGA CGCACCGGCT GGTACAGACC CCGCACGCCT TCCGCGCCGC CGCCCTGCGC
GCCGCGCACG CGGGCGCGGT CGAGGCCGTG GAGGACTCCG CCATGGTCGC CGACGCCGGC
GGACGGGTGG TCGTGCTGCC CGGCGAACCG GCCAACATCC ACGTCACGAC GCCGGAAGAG
CTCGAGATCG CCCGGCTGCT TCTCATCCAC GTCCAGAGCG AGGGGGAACC CGATGAGCAC
AGTGCTGCTC GACTCAGCGC TGTCCGATGA
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| Protein sequence | MSSAESAQPA RSAPGGPAWA IVLAAGGGTR FGGPKQFSDL GGLPLVAHPV RAAAAACDGV
VVVLPTPLLD RWAPPDGVRA IAGGATRAES VRAGLAAVPT EAEVIVVTDA AHPLATAALY
RSVVAAVRAG ADGAVPGLPL TEVVKGVLAS GPDLVTGASL ARETHRLVQT PHAFRAAALR
AAHAGAVEAV EDSAMVADAG GRVVVLPGEP ANIHVTTPEE LEIARLLLIH VQSEGEPDEH
SAARLSAVR
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