Gene Franean1_0797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0797 
Symbol 
ID5669213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp929400 
End bp930326 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content66% 
IMG OID641239725 
Producthypothetical protein 
Protein accessionYP_001505161 
Protein GI158312653 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.700709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0620251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAG TGCTGCTCGA CTCAGCGCTG TCCGATGACG AAAGGCGAGC CAAGCTGTAC 
GCGGGCGAGC TGTTCGTCTA CTCGCCGCGG CCCAGCACCA CGGCATTCGT CGAGTTCACC
CGCGAGCTGA TCCGGGATGC CTTCGGCGAC CTGGACCCCG AGACGGCGCA GCACCACATG
CCCGTCGAGG AGTACGCCGC CCTGCTCGCC GACCTGAAGC CGCGTTTCAT CCACCACCCG
ACCTGCAAGG AACTCCTGCC GGCGATGCTC GCCGAGCTGG GCTGCGACAT CAGCAAGACC
TACTTCGACG TCCCGCGGCT GCGGACGTCC ACCAGCGACG ACTACCTCAC CTCGGGTATC
GCCTACGCCT TCCACCCGCA CCGCGACACC TGGTACTCGG CGCCGTTCTG CCAGCTCAAC
TGGTGGATGC CGATCTTCGA CATCGTCCCG GAGAACGGGC TGGCCTTCCA TCCCCGCTAT
CTCACGCAGG GAGTCAAGAA CAGCTCGCGC ACCTACAACT ACTACGAGTG GAACAAGACG
AACCGCGCGT CGGCCGCCAA GCACATCAAG TCCGACACGC GCGTGCAGCC GAAGCCCGAG
GAGGAGGTCG AGATCTTCCC GCAGACGCGG GTGGTCGCGC CGCCCGGCGG AATGCTGGTC
TTCTCCGGCA ACCAGCTCCA CTCCTCGGTG CCGAACACCT CCGGCCGCAC CCGGTTCAGC
ATCGACTTCC GCACCGTGCA CTACGACGAC GTGGTGAACC ACGTGGGCTC GGTGAACGTC
GACTCCGAGT GCACCGGCAC GACGATGCGC GACTACCTGC GCGGCACCGA CCTCAGTCGC
ATCCCCGAGG ACATCTGCCT CAGCTACGAC ACCGCTCCCC CGCTGCCGGA CGCGATCCTC
GTCTACGAAC CCCAGACCAC CGCGTGA
 
Protein sequence
MSTVLLDSAL SDDERRAKLY AGELFVYSPR PSTTAFVEFT RELIRDAFGD LDPETAQHHM 
PVEEYAALLA DLKPRFIHHP TCKELLPAML AELGCDISKT YFDVPRLRTS TSDDYLTSGI
AYAFHPHRDT WYSAPFCQLN WWMPIFDIVP ENGLAFHPRY LTQGVKNSSR TYNYYEWNKT
NRASAAKHIK SDTRVQPKPE EEVEIFPQTR VVAPPGGMLV FSGNQLHSSV PNTSGRTRFS
IDFRTVHYDD VVNHVGSVNV DSECTGTTMR DYLRGTDLSR IPEDICLSYD TAPPLPDAIL
VYEPQTTA