| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0771 |
|---|
| Symbol | |
|---|
| ID | 5675664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 898556 |
|---|
| End bp | 899575 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641239699 |
|---|
| Product | stearoyl-CoA 9-desaturase |
|---|
| Protein accession | YP_001505135 |
|---|
| Protein GI | 158312627 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1398] Fatty-acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.833679 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.161411 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCTA CCGACACGGT GAAAGCGACC GAAACCAGGC ATCAAGGCGC GGCCGTGGTT
GGAGGTGACC AGTCCGTCGC GGATGCCGGC GGGGTCACGT CGCCGGCGCC GACCGAGTCC
CACACCACCA CTCCCTCGAT GTTCCGGGCG CGTGGCGAAC AGCTTGTGCT TGTGGCGACG
ATCCTATTTC CGTTCGCGGC GCTTGTCGCG GCAGTTCCGT TGTTGTGGGA CCACTGGATC
ACATGGCGGG ACGTCATCCT CGCGGCGGTG ATGTACGCGA TCACCGGCCA CGGCGTCACC
GTCGGATTCC ATCGCTATTT CACCCACCGG GGTTTCAAGA CCTCCAAGCC GGTGCGTGCC
GCGCTCGCCA TCGCCGGCAA CATGGCCATA GAGGGCCCGG TGATCCGCTG GGTGGCCGAC
CACCGCCGTC ACCACGCCTT CAGCGACGCC GACGGCGACC CGCACTCACC GTGGCGCTAC
GGCACCGGCC CGGCCGCCCT CGCCCGCGGG CTCTGGCACG CCCACGTCGG CTGGCTCTTC
GACGTCGAGC AGACCGACCA GCGCCGCTAC GCCCCCGACC TCCTGGACGA CCCGATGATC
GTCCGGGTGA GCCGTTCGTT TGCTCTCTGT GCCTTCGTCA GCCTCGCCCT GCCCGCGGTC
ATCGGCGGCC TGTGGGGCGG TTCGTTCGAG GCCGCGCTCC AGGCCTTCTT CTGGGCCTCG
CTCGTCCGGG TGGCGCTGCT CCACCATGTG ACCTGGTCGG TCAACAGCAT CTGCCACGTC
ATGGGCTCCC GGCCCTACCG CTCCCGCGAC CGCTCGGGCA ACGTGTGGCC GCTGGCCCTG
CTTTCCATGG GCGAGTCCTG GCACAACCTG CACCACGCCG AGCCGACCTC GGCCCGGCAC
GGCGTCCGCC CCTGGCAGAT CGACACCAGC TTCTACGTGA TCAAGACTCT GGAGATCCTC
GGGCTGGCCC GGGACGTCCG CTGGCCCGAC CCCGCCCGCC TGGCCGCCAA GCGCGCCTGA
|
|---|
| Protein sequence | MTATDTVKAT ETRHQGAAVV GGDQSVADAG GVTSPAPTES HTTTPSMFRA RGEQLVLVAT
ILFPFAALVA AVPLLWDHWI TWRDVILAAV MYAITGHGVT VGFHRYFTHR GFKTSKPVRA
ALAIAGNMAI EGPVIRWVAD HRRHHAFSDA DGDPHSPWRY GTGPAALARG LWHAHVGWLF
DVEQTDQRRY APDLLDDPMI VRVSRSFALC AFVSLALPAV IGGLWGGSFE AALQAFFWAS
LVRVALLHHV TWSVNSICHV MGSRPYRSRD RSGNVWPLAL LSMGESWHNL HHAEPTSARH
GVRPWQIDTS FYVIKTLEIL GLARDVRWPD PARLAAKRA
|
|---|
| |