Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0758 |
Symbol | |
ID | 5669174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 885304 |
End bp | 885933 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641239685 |
Product | acetyltransferase |
Protein accession | YP_001505122 |
Protein GI | 158312614 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.708622 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0152344 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCAGGG TTCTCGGCTT TCTTCGTTCC CTGCTCGACG CCCGCGCCCT CCTGCACTCA CTGCGGATCC TCCACTTCTA CAACTACTCG CATGTCCAGC AGGTTCGCCG GATGACGATC GAACGGGGTG TCCGCCTGGC GCCGAACGTC TCCGTCCGGA ACGGGGAGCG GGTGGAGATA CGGGCGTTCG CCCACATCGG TGAGCGGGTT TCGCTGTGGG CCGGTGACCG CACTGGCCGG ATCGAGATCG GCGAGCACTC CCTGATCGGC CCGGGCACGT TTCTCACGGC CGCGAACTAC GAGACGCTGC CGGACATCGT CATCGACAGC CAGCCGAAGC GGGAGGCGGA CATCGTCATC GGTAACGACG TGTGGGTCGG CGCCAACTCG GTGGTTCTTC CGGGCGTGAC GATAGGCGAC AGCACGATTG TCGGCGCCGG TTCTGTCGTC ACGAAGTCGT TGCCCGCCGG AGCGTTGGCC GCGGGTGTTC CGGCGAAGGT CATCGGGAAG CGCGGGGAGT CGACCCGTTC CGGTCGTGCC GTCCAGGCGG ACCGGCCTGA GCAGAACGGC CGTACCGGTG CGGACGGCAC CGGGCGGCGT CCCGGCTCCC ACCCGGCGGG TGAGCAGTGA
|
Protein sequence | MTRVLGFLRS LLDARALLHS LRILHFYNYS HVQQVRRMTI ERGVRLAPNV SVRNGERVEI RAFAHIGERV SLWAGDRTGR IEIGEHSLIG PGTFLTAANY ETLPDIVIDS QPKREADIVI GNDVWVGANS VVLPGVTIGD STIVGAGSVV TKSLPAGALA AGVPAKVIGK RGESTRSGRA VQADRPEQNG RTGADGTGRR PGSHPAGEQ
|
| |