Gene Franean1_0749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0749 
Symbol 
ID5669165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp874044 
End bp875150 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content70% 
IMG OID641239676 
Producthypothetical protein 
Protein accessionYP_001505113 
Protein GI158312605 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000166658 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAGGTGG AGGTTTCGTC CGCGTCGGGC GATCTGGTCT CCATCGGTGT GCGTGGCCTG 
AGGGGAGTGG AAGAGGCGTA CTTCCGTTCC TCGGACGTCG AGCTTGCCGA GACGGCGAAC
GCCGGCCTGA CCACCGCGCT GACAATCGCC ATGCGGCGCG GCGTGACTCT GGAGTGCGCG
GGGCCGATCA GCGAGGTGCT GGCCGCCAGG GTGGACGACT ACCAGGCGCT GATGTCGCGG
TGGTATCCCA CCCTCGAGCC GGTACAGGTG CTGACCGGGA CCGCCCGCTC GGTCCGGCCG
GCGGGGGCCG AGACCTTCTG CTTCTTCTCC GGCGGGGTCG ACAGCTTCTA CACGCTCCTA
CGCAACATCG ACAGGGTGGA CGCGGTCGTC TACGTGCACG GATTCGACGT CGGTCTGGAG
GACGTCGAGC TGCGACGAGT CGTCTCCGAC AGCCTGCGCC GGACGGTGGA GAGCCTCGGC
AAGGAGCTGA TCGAGCTCGA GACCGACCTG CGCGCGCTGT CGGATCCGCA CGTCAGCTGG
CCCGCCTACG TCTCGTCCGG GCTCGCCACC GTCGCGCACC TGTTGTCCCG GCGGTTCGGT
CGTGCGCTGG TCGCCGGGAC TCTCGCCTAC CACGAGCTGC AGCCGCTCGC CTCACACCCG
CTCACCGATC CGTTGCTGTC CAGCGACCAG ATCGCGATCG AGCACGACGG ATGTGACGCC
ACCCGCCAGG AGAAGGTCGC CTTCATCGCG AGGCACCCGG CCGTCCGGCG GAACCTGAGG
GTCTGCTGGG AGAACCCGGG CGGCGACTTC AACTGCGGCA GGTGCGAGAA GTGCCTGCGC
ACGATGCTCG CCCTGGAGTC CCTCGGCGTG CTCGGCGAGT TCACCTGCTT CCCGTCCGGT
CTTGATCCGG ATGTCGTGCG GCGGGTTGAC CTCCCCGGCC GAGGTCCCCG GCACTGGGCG
GTCGTGAACC TGCGTGAACT TCGCCGGGCG AACCGTGACC CCGTGCTCGT CAGGGCGCTT
GCCGAGGCGA TCGCGAGGTC CGACGCACGG CGGGTGCACC GGCTTGTGCG GCGGCGGGCC
CTGCACGGCC GGGCCGCGAC GACCTGA
 
Protein sequence
MKVEVSSASG DLVSIGVRGL RGVEEAYFRS SDVELAETAN AGLTTALTIA MRRGVTLECA 
GPISEVLAAR VDDYQALMSR WYPTLEPVQV LTGTARSVRP AGAETFCFFS GGVDSFYTLL
RNIDRVDAVV YVHGFDVGLE DVELRRVVSD SLRRTVESLG KELIELETDL RALSDPHVSW
PAYVSSGLAT VAHLLSRRFG RALVAGTLAY HELQPLASHP LTDPLLSSDQ IAIEHDGCDA
TRQEKVAFIA RHPAVRRNLR VCWENPGGDF NCGRCEKCLR TMLALESLGV LGEFTCFPSG
LDPDVVRRVD LPGRGPRHWA VVNLRELRRA NRDPVLVRAL AEAIARSDAR RVHRLVRRRA
LHGRAATT