Gene Franean1_0744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0744 
Symbol 
ID5669160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp868392 
End bp869399 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content77% 
IMG OID641239671 
Producturoporphyrin-III C/tetrapyrrole methyltransferase 
Protein accessionYP_001505108 
Protein GI158312600 
COG category[R] General function prediction only 
COG ID[COG0313] Predicted methyltransferases 
TIGRFAM ID[TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000109201 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCCGGGA CCCTCGTGCT GTGCGGTGCC CCGATCGGTG ACGTGCGCGA CGCGAGCCCG 
CGGCTGGGCG AGGTGCTCGC GACCGCCGAC GTGATCGCCG CCGAGGACAC CCGCCGGGTG
CGCCGGCTCG CGCACGCGCT CGGGATCACG ATCACGGGGC GGGTCGTCTC CTGTTACGAC
GCGGTCGAGG GCGCCCGGGC GGAGATGCTC ACCGAGCAGT TGCTCGCCGG CCGCACCGTC
GCGCTCGTCA CGGATGCGGG CATGCCCGCG GTCTCCGACC CCGGCTACCG GGTCGTCGCG
GCGGCGGCCG CGGCCGGGGT GGCGATCACC GTGGTCCCCG GGCCGTCGGC GGTCACGGCG
GCGCTGGCCG TCAGCGGGCT GCCCTCGGAC CGCTGGACCT TCGAGGGGTT TCTGCCCCGC
AAGGCGGGCG AACGCCGGTC ACGGCTGCGC GGGCTCGCCG CGGAGAGCCG GACGATGGTC
TTCCTGGAGT CGCCGCACCG GCTGGGCGCG TCGCTGCGTG ACCTGGCGGA GGCCTTCGGC
GGGCCGCGCC GGGCGACGCT GTGCCGGGAG CTCACGAAGA CCTGGGAGGA GATCGTCCGC
ACCGACCTGG CCGGCCTGGT CGACTGGGCC GGCGACGGGC GCACCGTCCG TGGCGAGTTC
ACCCTGGTGA TCGCCGGCGA CGCGAGCGCT GGGACGGCCA GGCCCGCCCG GGAGGCCGGA
GCGAGCGCAC CAGTTGGCGC GCTCTGGGCA GGGACGGGGC CGCACAAGGC CGGTGCCGCG
GCCGCGGCAC CGGCCAGGCC GGGGGCTGGT CTCGCGGCGC CCACTCAGGC CGGGCCGGAG
GTGCTCGCCG CGGCGGTGGC CCGCCTGACG GCGGGTGGCA TGCCGGCGCG GGACGCGCGT
AAGGCGGTGG CCGCCGAGTA CTCCCTGTCA CCCCGGGAGG TGTACGCGGC GGTGATCGCC
GCCCGCGACC TGGAACGGGC AGAGACCCCG GGAACAGACG AGGGGTGA
 
Protein sequence
MSGTLVLCGA PIGDVRDASP RLGEVLATAD VIAAEDTRRV RRLAHALGIT ITGRVVSCYD 
AVEGARAEML TEQLLAGRTV ALVTDAGMPA VSDPGYRVVA AAAAAGVAIT VVPGPSAVTA
ALAVSGLPSD RWTFEGFLPR KAGERRSRLR GLAAESRTMV FLESPHRLGA SLRDLAEAFG
GPRRATLCRE LTKTWEEIVR TDLAGLVDWA GDGRTVRGEF TLVIAGDASA GTARPAREAG
ASAPVGALWA GTGPHKAGAA AAAPARPGAG LAAPTQAGPE VLAAAVARLT AGGMPARDAR
KAVAAEYSLS PREVYAAVIA ARDLERAETP GTDEG