| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0740 |
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| Symbol | |
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| ID | 5669156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 862571 |
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| End bp | 864355 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641239667 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_001505104 |
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| Protein GI | 158312596 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000780754 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCGCAT CCGACTACCC GCCGATCGAG GAGCACGCGG TCATCGGCGA CCTGCGCACC
GTGGCCCTGG TCGCCACGGA CGGCACGATC GACTGGTACT GCCCGCAGCG CTTCGACGGT
CCGTCGGTCT TCGCGAGCCT GCTCGACGCC GACCGCGGCG GCTCCTTCCG CATCCACTGC
TCGCAGTCGA AGGCCAAGCA GCTCTACCTG CCCGACTCGA ACGTCCTGAT GACCCGCTTC
CTCACGCCGC ACTCGGTGGG CGAGGTCGTC GACTTCATGG TCCCGGTCGA CAACGACCTG
ACCGAGACGC CGCACGTGGT CGTCCGCCAG GCCCGCGCCG TGCGCGGCAC CGCCGGGTTC
CGGCTGCGCT GCGACCCCCG GTTCGACTAC GGACGGGCGT CCCACACGGT GACGCTGGTG
CCCGGCGCCG GCGCGGTCTT CGAGTCGGCC ACCGGCACCC TTGTGCTGCG CACGGCGCTG
CCGCTGCGGG TCGACGGCAC CGCGGTCGCC TGCGACTTCG AGCTGGCGAC GGGCGAGACG
GCCGACATCG TCCTCGAGTG GGACTCCCGG ATCCGCCCGC TGCAGCCCGG CGAGGCCGAC
AACCTGTTCA CCCGGACGCT GGAGTACTGG CAGACGTGGG TGCGCCGGGG CCGGTACCAC
GGCCGCTGGC GGGAGATGGT GCTGCGCTCG GCGCTGGTAC TCAAGCTGCT GGTCTACCGC
CCGACCGGAG CACTCATCGC GGCGCCGACC ACCTCCCTGC CGGAGGAGCT GGGCGGGGTG
CGCAACTGGG ACTACCGCTA CACCTGGATC CGCGACGCGG CGTTCACCAC CTACGCGCTG
ATGGCCCTCG GGTTCACCGA GGAGGCCGCC GCGTTCATGG ACTGGCTCGA GCAGCGCTGC
AAGGAGGCGC CGCCCGAGCT CGGCCTGGGC GTGCTGTACA GCGTGGACGG CAACGCCGAC
CTGGACGAGA TCGTCCTCGA CCACCTCGCC GGCTACCGGG GCTCGAAGCC GGTGCGCATC
GGCAACGGCG CCGCCGGCCA GCTTCAGATC GACATCTACG GCGAGCTGAT GGACTCGGTG
TACCTGTACA ACAAGCGGGT CCCGATCTCC TTCCAGCTGT GGGAGGCGCT CGGCCGTCAG
CTCGACTGGC TGGCCAGGCA CTGGGAGCAG CCCGACGAGG GCATCTGGGA GACCCGGGGC
GGACGGCAGC GCTTCACCTA CTCGGCGGTC ATGACCTGGG TGGCGTTCGA GCGTGCCTGC
CGGATCTCCC GGCAGCGCGG TCTGCCCGGG CCCACCAACG ACTGGAAGGA CCACGCCGGG
CGGGCCTACC GGTTCGTCCA GAACGAGGCC TGGGATCCCC GGAAGGGGGC CTACATGGAG
TTCCCGGGCT CGCCGCGGCT GGACGCCTCG CTGCTGTGCA TGCCGCTCGT GAAGTTCTCC
GGCCCGACCG ACCCCCGCTT CCTGTCGACG CTGGACCGGG TCGGCTCGGA GCTGGTGAGC
GACAGCCTGG TGCGCAGGTA CGCCGCGGAC GGCAGCGACG GCCTGACCGG GGACGAGGGC
ACGTTCAACC TGTGCTCGTT CTGGTACGTG GAGGCGCTGA CCCGTGCCGG CCGCACGACC
GAGGCCCGGC TGGTCTTCGA GAAGATGCTC ACCTACGCCA ACCACGTGGG GCTCTACGCC
GAGGAGATCG GCCCCTCCGG CGAGGCCCTG GGCAACTTCC CGCAGGCCTT CACCCACCTA
GCCCTGATCA GCGCGGCGAT CCACCTGGAC CGCGCCTTGG GCTGA
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| Protein sequence | MPASDYPPIE EHAVIGDLRT VALVATDGTI DWYCPQRFDG PSVFASLLDA DRGGSFRIHC
SQSKAKQLYL PDSNVLMTRF LTPHSVGEVV DFMVPVDNDL TETPHVVVRQ ARAVRGTAGF
RLRCDPRFDY GRASHTVTLV PGAGAVFESA TGTLVLRTAL PLRVDGTAVA CDFELATGET
ADIVLEWDSR IRPLQPGEAD NLFTRTLEYW QTWVRRGRYH GRWREMVLRS ALVLKLLVYR
PTGALIAAPT TSLPEELGGV RNWDYRYTWI RDAAFTTYAL MALGFTEEAA AFMDWLEQRC
KEAPPELGLG VLYSVDGNAD LDEIVLDHLA GYRGSKPVRI GNGAAGQLQI DIYGELMDSV
YLYNKRVPIS FQLWEALGRQ LDWLARHWEQ PDEGIWETRG GRQRFTYSAV MTWVAFERAC
RISRQRGLPG PTNDWKDHAG RAYRFVQNEA WDPRKGAYME FPGSPRLDAS LLCMPLVKFS
GPTDPRFLST LDRVGSELVS DSLVRRYAAD GSDGLTGDEG TFNLCSFWYV EALTRAGRTT
EARLVFEKML TYANHVGLYA EEIGPSGEAL GNFPQAFTHL ALISAAIHLD RALG
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