| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0725 |
|---|
| Symbol | |
|---|
| ID | 5669141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 841912 |
|---|
| End bp | 843294 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641239652 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001505089 |
|---|
| Protein GI | 158312581 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0943414 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.106299 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGCA TCCGCTTCCT CAACGCGTTC GACACCGCCC TGCTCGAATA CCAGCTCCTG
CACGCCGACG TGCCGATAAA CGTGAACTGC CTGCTTCTCG GTACCGGACC GGCTCCTGGA
ATCGACGAGC TACGCGCTTT TGTCGCCGAG CGCCTGCGCC GGTTCCCGCT GTTGACCGAG
CGGCTCGTCT GCCTGCCGGA GCGCCGCGCG AGATACGGCT GGCGCGCCGA TCCCGAGGTC
GACCTGGACT GCCTCGTCCG CGAGCAGCCG GTGTCGTCGG CCGCGCCCGC ACCCCCGTCC
GTGGACGGGG CCGCGGCGGC ACCGGGGTTC GCCGGGACGG CGCTGCGCGA CTTCGTGGAA
CGGCTCAGCG GCGCGGTGGT GCCGCTGTCG GGGCCGCCGT GGCAGCTGTG GCTGCTGCGC
TCCGCCGACG ATACCGAGTT CGCCCTGTTC TACCGGGCCA GCCACATCCA GCAGGACGGC
ACGGCGAAGA ACCTCGTCCT CTCGGCCCTG TTCGGCATCG GTACCGACCC GATGGCGTTC
GTCCCGCCGC AGCGGCGCGA ACCCGGTCGT GCCCGGGCCC GGGAGGTCGG AGCCGCCGCT
GCGCGCTCCC TGCGGTGGCT CACCCCCGCC GCCGGGTCGG CGGTCCTCGC GGCTCCGTGG
GCGGGGCGGA CCACACACAG CTGGGAGACG ACGTCCCTGT CGCTGCTGCG CTCGATCGGC
GCCGCGGTGG GCGGCACCGT CAACGACGCC TTCCTGGCGG CGCTCGCCGG CGCCCTGCGA
CGGTGGACCG GCGCGGGTGG CGCGGCCGGC GCTGGCGGCG TGGTCGGGGC GGGGGGTGCG
CTGCCCGGCC GGGCCGGTGG GATGGCGGTC GCGATGGCCG TCAGCACCCG CCAGCCGGGG
GAGCGCGCGA TGCTCGCGAA CTTCGTGGCG GGTGCCCGCG TCGTCCTGCC GTGTGCCGAG
CCGCTCCCGC TCGGCCGCCT GTTCGCGGTA CGTGACCGGA CGGATCGTCT CAAGCAGGGC
GGCACGCTCG GCCTGGGCGA GCGCCTGCTC TTCGAGCTGC TGCCCGCGCG GGCCCGGCCC
CGCCTGTTCG GCGCCGGGCT GAGCGGACGT TCGTCGGTGC TGTCGGTGTC CAACCAGGCC
GGGGCACCGG GCCCACTGGC CGCGGCCGGA CGGCCGATCA CGACGGCCGT GCCCGTCCCG
ACCCTGTTCC CGGGCGAGCG GCTCGCCTGC CACCTCAGCG GCCTCGGTGA CACCGTGAGC
GTCGGGACGG CCGCGGACGC CGGTCTGCCC GGATCGCGCG ATCTCGCCCG GCTGTGGGCG
GCGGAGGTCA CGTTGCTCGC CGACGCCGTC CGGGCGTTCG CCGGGGACCG GGCGCTGCCA
TGA
|
|---|
| Protein sequence | MDRIRFLNAF DTALLEYQLL HADVPINVNC LLLGTGPAPG IDELRAFVAE RLRRFPLLTE
RLVCLPERRA RYGWRADPEV DLDCLVREQP VSSAAPAPPS VDGAAAAPGF AGTALRDFVE
RLSGAVVPLS GPPWQLWLLR SADDTEFALF YRASHIQQDG TAKNLVLSAL FGIGTDPMAF
VPPQRREPGR ARAREVGAAA ARSLRWLTPA AGSAVLAAPW AGRTTHSWET TSLSLLRSIG
AAVGGTVNDA FLAALAGALR RWTGAGGAAG AGGVVGAGGA LPGRAGGMAV AMAVSTRQPG
ERAMLANFVA GARVVLPCAE PLPLGRLFAV RDRTDRLKQG GTLGLGERLL FELLPARARP
RLFGAGLSGR SSVLSVSNQA GAPGPLAAAG RPITTAVPVP TLFPGERLAC HLSGLGDTVS
VGTAADAGLP GSRDLARLWA AEVTLLADAV RAFAGDRALP
|
|---|
| |