Gene Franean1_0702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0702 
Symbol 
ID5669119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp821101 
End bp821670 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content65% 
IMG OID641239630 
Producthypothetical protein 
Protein accessionYP_001505067 
Protein GI158312559 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2124] Cytochrome P450 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.662767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACT GGAAGACAAT CGACTACTTC ACGGACGAGT CACTCGTCGC GGATCCCTAC 
CCGTACTTCG ACGAGCTCCG CGAGGCGGGC CCGGTGTTGC CGCTGCCTCA TCTCGGGATG
GTTGCCGTGA CCGGCTACGA GGAGGCCAGC CAGGTCTACC GTGAGGCGGA GACGTTCTCC
TCGTGCAGCT CGGTGGTCGG TCCGTTCGCT ACGTTCCCGG TCCCGCTCGA GGGAGACGAC
GTGAGCGAGA TCATCGACAG GTACCGCACC CGGCTGCCGA TGTTCGAGCA CATGGTCACG
ATGGACCCGC CGGACCACAC CCGGGAGCGG GCGTTGCTGA TGCGCCTGCT GACACCGAGA
CGGCTCAAAG AGAACGAGAG GTTCATCTCG CGCCAGGCGG ACCGGCAGCT GGACGAATTC
ATCGACCGAG GTACCTGCGA GTTCGTCCGG GAGTACGCCC AGCCCTTCAC CATGACCGGA
CCACTGACAT CCGGCTGTCC GAAGAGCACC ACGGGCCGGC GGGTGCCCGG CGTTTCACCT
ACGACCCCAC CTGGCTCATG CGCGGCCTGA
 
Protein sequence
MSDWKTIDYF TDESLVADPY PYFDELREAG PVLPLPHLGM VAVTGYEEAS QVYREAETFS 
SCSSVVGPFA TFPVPLEGDD VSEIIDRYRT RLPMFEHMVT MDPPDHTRER ALLMRLLTPR
RLKENERFIS RQADRQLDEF IDRGTCEFVR EYAQPFTMTG PLTSGCPKST TGRRVPGVSP
TTPPGSCAA