Gene Franean1_0701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0701 
Symbol 
ID5669118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp819956 
End bp821002 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content70% 
IMG OID641239629 
Productaldo/keto reductase 
Protein accessionYP_001505066 
Protein GI158312558 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.699479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTACC TGACCTTCGG ACGGCACACC GGCCTGCGGG TCTCGGAGTA CGCGCTCGGG 
ACCGCGAACT TCGGCACGGC CGACACCAGC GCCGGTCGGG ACACCTCGCG GCAGATCTTC
GACGCCTTCG TCGCCGCCGG CGGTACGACG TTCGACACGT CCAACCTCTA CCAGGACGGA
CAGGCCGAGA CCGTGCTCGG TGAGCTGCTC GGCAGTCGCC GGGACGACTT CGTCGTGATC
ACCAAGTACG GCGGGACGAG GCGGGACCAG CCCCGCCCCG GCACGACCGG CAACAGCCGA
AAGATCATGA TTCGCTCCCT GGAGGCCAGC CTGCGGCGGC TGAACACGGA CTACGTCGAC
GTCTTCATGC CGCACTTCCC CGACGGAACC ACCCCGATCG ACGAGATCCT GGCCGGGTTC
GACGACCTGA GCCGCGCCGG GAAGATCCGG TACGGCGGGC TGTCCAACTT TCCGGCCTGG
CGGGTCGCCG GCGCCGTGGT CCGGGCGGAC CTGCGCGGAC TCGCCCCGCT GGTCGGCATC
CAGACCGAGT ACAGCCTGGC CGAACGCTCC GCCGAGCGGG AACTGCTACC GATGGTGCAG
GCCCATGGCC TGGGAGTGTT CCTGTACTCG CCGCTGGCCG GAGGTCTGCT CAGCGGCAAG
TACCGGCAGG GTGGGAAAGG CCGGTTGAGC GTTCGCGGCG ACGCCGTCGA GCGCACCGTT
CAGCAGAGCG CCGTCGTCGA CGGGGTGTTG GCCGTCGCCG ACGAGATCGG CAGCACCGCG
GTCCAGGTCT CGCTGGCCTG GCTGCGTCGC CGGGCCGTGT CGGCCCGGAC CGCGCTGATC
CCGATCGTCG GGCCTCGCAC GCTGTCCCAC CTCGAGCAGT ACCTGCGCTC GCTCGAGCTG
GAACTCGACG AACAGCACTG TCGACGTCTC GACGAGATCA GCGCGATCCG GTTGGGCACT
CCGCACGAGG ACGTCGCGGC AGCTCTGGCC CACGGCTTCG ACGGCGACCG CACCCTGCTC
CAGACCCTGT ACCTCCCCGT GATCTGA
 
Protein sequence
MRYLTFGRHT GLRVSEYALG TANFGTADTS AGRDTSRQIF DAFVAAGGTT FDTSNLYQDG 
QAETVLGELL GSRRDDFVVI TKYGGTRRDQ PRPGTTGNSR KIMIRSLEAS LRRLNTDYVD
VFMPHFPDGT TPIDEILAGF DDLSRAGKIR YGGLSNFPAW RVAGAVVRAD LRGLAPLVGI
QTEYSLAERS AERELLPMVQ AHGLGVFLYS PLAGGLLSGK YRQGGKGRLS VRGDAVERTV
QQSAVVDGVL AVADEIGSTA VQVSLAWLRR RAVSARTALI PIVGPRTLSH LEQYLRSLEL
ELDEQHCRRL DEISAIRLGT PHEDVAAALA HGFDGDRTLL QTLYLPVI