Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0700 |
Symbol | |
ID | 5669117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 819345 |
End bp | 819881 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641239628 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001505065 |
Protein GI | 158312557 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.665559 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAGGG TAGGGCAGGC GCACCTCGAC GCCCGGCGGC AACAGATCCT GGATGCCGCC CGCGCCCGCT TCGCCAGCCA CGGTTTCGCT CGGACCTCGA TGGCCGACGT CGTCGCGGAG TCAGGGCTCT CCACAGGGGC GATCTACCGG TACTTCACCA GCAAGGACGA GATCGTCATC GCTGTCTGCG AGCAGGCGAG CAACGCCCTT CCGGCGGCGC TGACCATCGA GGCCGTGAGC GGTTTCCTCG AGCACGTGAG AACGTTGGCG CGGGAGACAG GCCACGCACG GCTGGTAGCC CAGATCTACG CCGAGGCGGC GGTGTCCCCG GCGCTCGCGT CGATCGTCCA GCGACAGCTC TCCACGATGC GCGCGGCGGT CGCCGAGCTG GTACCCGACC GCCAACCCGA CGATGCCGGA CAGATCGCCG AAGCCTTCGT GGCCGTCTGC AGCAGTTACA GCCAGCAACT CGCCGTCCGC GGCGACCTGG ACCCCGCACC CTTCACCTCG GCCTTGATGG CGATCATCAA GGGGTAG
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Protein sequence | MPRVGQAHLD ARRQQILDAA RARFASHGFA RTSMADVVAE SGLSTGAIYR YFTSKDEIVI AVCEQASNAL PAALTIEAVS GFLEHVRTLA RETGHARLVA QIYAEAAVSP ALASIVQRQL STMRAAVAEL VPDRQPDDAG QIAEAFVAVC SSYSQQLAVR GDLDPAPFTS ALMAIIKG
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