Gene Franean1_0692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0692 
Symbol 
ID5669109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp810916 
End bp811548 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content72% 
IMG OID641239619 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001505057 
Protein GI158312549 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0892137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAGCGC CTGGCTGGCC GGTCACCCTG CGCCACGATG ACGTCGTCGT CCGGCCCATG 
CGCCTGCGTG ACGCCCCGAC CTGGGTCGAG GTCCGCACGC GCAACGCCGA CTGGCTCGCT
CCGTGGGAGG CCACCTCGCC GGGCTCGGCG TCGGTGCGGG CCACCTGGAA CGAGCGCCAG
ACCATCGGCG TCTACACGCA GATGCTCCAG CGGCTGCGGG CACAGGCCCG GGTGGGCGCG
GCGCTCCCGT TCGCCATCGC CGTCGACGGA CGGTTGGTGG GGCAGCTCAC AGTGTCAACG
ATCGTGCGCG GGGCGTTCAA CAACGGCCAG GTCGGCTACT GGGTGGACGG CGCGCACGCC
GGCCGCGGTA TCGCCCCGAC GGCGCTGGCG ATGGTCACCG ACCACTGTTT CGGCCCGGTC
GGGCTGCACC GGCTGGAGGC CAACGTCCGC CCGGAGAACG CGGCCAGCCG CCGGATGCTG
GTGAAGCTGG GCTTCCGCGA GGAGGGCCTG CACCGCAGAT TTCTCGCGAT CGACGGCCGG
TACCGCGACC ATATCGGCTA TGCACTGACG ACCGAGGACG TCCCCGGGGG ATTGCTGGCC
CGCTGGAGCC GCACCCGTTC GCCCTCCTCC TGA
 
Protein sequence
MRAPGWPVTL RHDDVVVRPM RLRDAPTWVE VRTRNADWLA PWEATSPGSA SVRATWNERQ 
TIGVYTQMLQ RLRAQARVGA ALPFAIAVDG RLVGQLTVST IVRGAFNNGQ VGYWVDGAHA
GRGIAPTALA MVTDHCFGPV GLHRLEANVR PENAASRRML VKLGFREEGL HRRFLAIDGR
YRDHIGYALT TEDVPGGLLA RWSRTRSPSS