| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0675 |
|---|
| Symbol | |
|---|
| ID | 5669092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 796941 |
|---|
| End bp | 798512 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 641239602 |
|---|
| Product | amidase |
|---|
| Protein accession | YP_001505040 |
|---|
| Protein GI | 158312532 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | [TIGR02713] allophanate hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.496846 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGACC GCCCGGTGAG CGACCGGAGC ACGCGCCGCC CCACCCCGCC GGACCTGCAG
GCCGACGTCC TGCGCGCCGG CTACCTCGCG GGACGGCTGA GCGTGCGCGA GGTGGTGGAC
GGCGTCTACG ACCGGATCGC TGCACGCGGC GACGACGGGG TGTGGATCAC CCTGGTGCCC
CGCGCGGAGG CGATGCGCCG GGCCACCGAG CTGGACGTCC TGCTGGCGAG CGCACGCCTC
GGACACGCCG GCCCCGACGG GCTCGGGCCC GAGCCCGGGA CGGCGGCCGG GACCGGGCCC
AGCCTGCCCC CCCTGTTCGG GCTGCCGTTC GCGGTGAAGG ACAACATCGA CATCGCCGGG
CTGCCCACGA CGGCCGGCTG CCCCGATTTC AGCCGGCTCC CGGCGGGCAC CGCGCCGGCG
GTCGCCCGGC TGCTCGCGGC CGGCGCGGTC TGCGTCGGGA AGACCAACCT CGACCAGTTC
GCCACGGGGC TGTCCGGCAC CCGCTCCCCC TACGGGATCC CCGCGTCCCC GTTCGACCCA
TACATGATCG CCGGCGGGTC GAGCTCGGGA TCCGGTGTGG CCGTCGCGGA CGGGCTGGTC
ACGTTCGCGG TCGGCACGGA CACCGCCGGC TCGGGCCGGG TGCCGGCGGC GCTGACGAAC
ACCGTCGGGC TCAAGCCGTC CCGCGGGCTG GTGAGCACCA GGGGCGTGGT GCCCGCCTGC
CGCTCGCTGG ACTGCCCGAG CGTCTTCGCG CTCTCCGTAC CCGACGCCTA CCGCGTGCTG
TCGGTGATGA GCGGCTACGA CGAGGAGGAC CCGTACTCCC GCCGGTTCCC CGGGCTCGGA
AGCCCGGCGC CGGGCGGAGC GCCGCGGACC GGAGCGCCGC GGACCGAAGT GCCGCGGATC
GGCGTGCCCC GGGCCGATCA GCTCGACTTC CTCGGCGACG CGGGCGCCGC GGCCGTGTTC
GGTGTCGGCG TGGACCTGCT CGCCGACGGG GGCGCCGAGG TGACGGAGAT CGACCTCGGC
CCGTTCCTGG AGGCGGGCAC CCTGCTCTAC GGCGGCCCGT GGCTGGCGGA GCGGTACGCC
GCTGTGGAGG CGTTCCTTCA GACGGTCCCG GACGCCGGCC CGGCGGACCC GGTGCATCCC
GTCATCCGGG CGGTTCTCGA ACCGGGCGCG GGAATCACCG GCGCCGAGGT GTTCCGCGGC
CTGACCCGGC TGCGCGCCCT ACGGCGCAGC GCGGAGCGGA CGTGGGTGGA CGTCGACATG
GTCGTGGTGC CGACCGTTCC GACGACGTAC CGGATCGACG CGATGCTCGC CGACCCGATC
CGCCTCAACG CAAACCTCGG CCGGTACACG ACGTTCGCGA ACCTGCTGGA CCTGGCCGCG
GTGGCCGTTC CGGTGGGGTT TGCGGCGGGC CTGCCGTTCG GTGTCACCCT GCTGGCTCCG
GCGGGGGGCG ACGAGCTGCT GGCGGCGCCG GCCGAGCTGC TGCACCGGTG CAGCGGCCTG
CCGGTCGGCG CGGGCTCCCA TTCCCTCCTG CTCCCCGCCG CCACCGACGT CGCGGCGGAG
ATCCTGGCCT GA
|
|---|
| Protein sequence | MSDRPVSDRS TRRPTPPDLQ ADVLRAGYLA GRLSVREVVD GVYDRIAARG DDGVWITLVP
RAEAMRRATE LDVLLASARL GHAGPDGLGP EPGTAAGTGP SLPPLFGLPF AVKDNIDIAG
LPTTAGCPDF SRLPAGTAPA VARLLAAGAV CVGKTNLDQF ATGLSGTRSP YGIPASPFDP
YMIAGGSSSG SGVAVADGLV TFAVGTDTAG SGRVPAALTN TVGLKPSRGL VSTRGVVPAC
RSLDCPSVFA LSVPDAYRVL SVMSGYDEED PYSRRFPGLG SPAPGGAPRT GAPRTEVPRI
GVPRADQLDF LGDAGAAAVF GVGVDLLADG GAEVTEIDLG PFLEAGTLLY GGPWLAERYA
AVEAFLQTVP DAGPADPVHP VIRAVLEPGA GITGAEVFRG LTRLRALRRS AERTWVDVDM
VVVPTVPTTY RIDAMLADPI RLNANLGRYT TFANLLDLAA VAVPVGFAAG LPFGVTLLAP
AGGDELLAAP AELLHRCSGL PVGAGSHSLL LPAATDVAAE ILA
|
|---|
| |