| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0663 |
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| Symbol | |
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| ID | 5669080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 778608 |
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| End bp | 779969 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641239590 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001505028 |
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| Protein GI | 158312520 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.897652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGGATC TCCCCATCTC CGCCGCGCCG CTGCGCGCGC TCGGCCCGGA TCGGCTGCCG
GCGGCGGTGC TCGCGTGCCT GCGGGAGTGG CCCGCGCGGC GCGGAGAGAT CGGCGGCTAC
CTCTACTCGC CGGCGGTGGC CGCGGCACGG GCCGCCGAGC TGCGCCGACA CCTGCCCGAC
TGGGCGGAGC TGCTCTTCGC GGTCAAGGCG AACGCCTTCC CCCCGATCCT CGACGCCCTG
CTCGCCGGAA CCGCGAGCAC CGACGCCGGG ACCGCCGCGG GTGCCGGGGC CGGCATCGAT
GGGTTCGAGG TCTCGTCGGC GCACGAGCTC GTCCTGGCCG CCGCGGCCGT GGAGCGCGCC
CGGCAGCGGG GCGCGGTGCG GGCGGCCGGG CAACACCCGT CCGGCGGGGC GCGGCTGGTG
GCGTCCGGGC CGGGCAAGTC GGTGAGCCTG CTGCGTGCGC TCCTTGGCGC GGTGCCGGTG
GAGGGCGCGG TGCCGGCGGT CGACGTCGTC AACGCCGAGA GCCCGCTGGA GCTGCGGCGG
ATCGACGCCG TGGCGGCGGA GACGGGGCGG CGGGCCGCCG TCGCGCTGCG GGTGAACCCG
GCCCGCGTCG GCCTCTCCGG CTCGCTGCGG ATGGGCGGGC GCCCGACCGC TTTCGGAATC
CAGGAGCGGG ACGTGCCCGC GGCGGTCGAG CTGGCCCGCT CGCTGCCGTG GATCGACCTG
GTCGGCTTCC ACGTCCACGC GGTGTCGGGG AACCTCGATG CCACCGCCCA CCTGGACTAT
GTGCGGTGGT GCCTGGACTT CGCCGTCCGT CAGGCCCGCC TGGGCGATGT CGACCTGCGG
GTGGTGGATG TAGGCGGCGG CCTCGGGGTG CCCTTCGAGC CCGACCGGCT CGGCGAGCGC
CCCTTCGACC TGGACGTCTT CGGCGCCGGC CTGGACCAGT TGCGCCCCCC GACCGGGGTC
CGGGTGGTCT TCGAGCCCGG CCGGGCCCTG GTGGCCGACT GCGGCTGGTA CGCGGCCGAG
GTGACCGACG TCAAGCTGGT CCACGGCGGT GCCTTCGCGG TCCTGCGCGG CGGCATCCAC
CACTTCCAGC TGCCGACGTC CTGGGAGATC GTCCACAACT TCGCCGTCGT CCCGCGGGAC
GACTGGCTGC CCGGCTGGCC CCGGCCGGAG GTGGCTGCGG GCCCGGTGAC CGTGGTGGGG
GAGCTGTGCA CCCCCGAGGA CACCCTCGCC CGCGACGTGA CCGTCGACCG GCTGCGCGCC
GGGGATGTCG TCGTCTTCCC GATGGCCGGC GCCTACGGCT ACGAGTTCGC GATGCACGAG
TTCCTCGGCC ACCCGCGCGC CCACCGCGTC GTCGTGGACT AG
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| Protein sequence | MLDLPISAAP LRALGPDRLP AAVLACLREW PARRGEIGGY LYSPAVAAAR AAELRRHLPD
WAELLFAVKA NAFPPILDAL LAGTASTDAG TAAGAGAGID GFEVSSAHEL VLAAAAVERA
RQRGAVRAAG QHPSGGARLV ASGPGKSVSL LRALLGAVPV EGAVPAVDVV NAESPLELRR
IDAVAAETGR RAAVALRVNP ARVGLSGSLR MGGRPTAFGI QERDVPAAVE LARSLPWIDL
VGFHVHAVSG NLDATAHLDY VRWCLDFAVR QARLGDVDLR VVDVGGGLGV PFEPDRLGER
PFDLDVFGAG LDQLRPPTGV RVVFEPGRAL VADCGWYAAE VTDVKLVHGG AFAVLRGGIH
HFQLPTSWEI VHNFAVVPRD DWLPGWPRPE VAAGPVTVVG ELCTPEDTLA RDVTVDRLRA
GDVVVFPMAG AYGYEFAMHE FLGHPRAHRV VVD
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