Gene Franean1_0644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0644 
Symbol 
ID5669061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp748974 
End bp749828 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content75% 
IMG OID641239571 
Producthypothetical protein 
Protein accessionYP_001505009 
Protein GI158312501 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.538216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.560918 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTCT ACGACAAGGT CGAGTCGACG TTCTACGGCT GGTGTGTGGA ACGTCTGCTG 
ACCACCGCGG AGCACGGCGG ATGCCTGGCC GGCGGGATCC TGGAGATCGG CTCGGGGACG
GCCGTGCCGG TGGTGCGGGC CCTGCTGCGC TCCGGCTCCG ACACGCGGGT GCACGGATTC
GAGCGCGACC CGCGGGCGGC GGCGACGGCG CGGCGCGCGA TCGGGCTGAC CCCGCTGCGC
AACTACGTCG TCGACGAGGG CGACTTCTTC ACCGCGGTGC CGACGGCCGC CCAGCGCTGC
GTGATCGGGA ACCCGCCGTA CCTCCCGGCC GAGCCGGGCA CGTCCTGCGC GCCGGACCTC
TGGGGCGGCC CCCGCGGCGC CGAGGTCACC CAGGACGTCC TGGACTGCGG GCTCGACCTG
GCGATGCTGA TCGTCTCCTC GATCGCCGAC CCGCTGGGAG TGCTCCGGTT CGCCCGTGAT
CGGGGCTACT CCGTCACCGA CTGGATGGTC ACGCCGATCC GCTTCGGGAG GTTCTGCCGG
GACGCCGGGG TCCGCGCCCG CATCGGCGAT CTCGCCGGCC GCGAGCAGGC GTTCTTCGCC
CCCCACTCGT ACCTGATCGC CGGGGTCACC TTCGTGCGCG ACGCCGGCGC CCGGGACCAG
AGCGCCGTGC TGGGGGACGT CCTGCGCGCC GCCGGCCGGG CGTCGGAGGT CGCCGATCCG
CAACCCCGGG CGGGCGGGGC CGTGGTGGGG GCTCCGGCCG GGACAGAACG GGTTGTGGCG
GGAGCGCAGG CCGGAGCCGC GAAGCGGGCC GGGACGGCGG CGCGGGCCGG GACAGCACAG
CCGGTCGGGC GATGA
 
Protein sequence
MSFYDKVEST FYGWCVERLL TTAEHGGCLA GGILEIGSGT AVPVVRALLR SGSDTRVHGF 
ERDPRAAATA RRAIGLTPLR NYVVDEGDFF TAVPTAAQRC VIGNPPYLPA EPGTSCAPDL
WGGPRGAEVT QDVLDCGLDL AMLIVSSIAD PLGVLRFARD RGYSVTDWMV TPIRFGRFCR
DAGVRARIGD LAGREQAFFA PHSYLIAGVT FVRDAGARDQ SAVLGDVLRA AGRASEVADP
QPRAGGAVVG APAGTERVVA GAQAGAAKRA GTAARAGTAQ PVGR