| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0630 |
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| Symbol | |
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| ID | 5669047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 729666 |
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| End bp | 731117 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641239557 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001504995 |
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| Protein GI | 158312487 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.679852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGGGA ACGTGTCAGA ACCCCGCCCG CGGCACCTGG ACCCGCGAGG CCCCGGCACC
CGCCCGGGCC CGGGCACCCG CCGGGCCGGC TCGTCCCCAC GCCGCGCCGG CCCGCTGGCC
GCGCTGCTCG CCGGGACGGT CACGGTCGGC CTGCTCGCGG GCTGCGGCGG CGGCTCCGGC
GCGGCCACCG ATCCGGCCGA GAGCCTGCGT CCGACGGCGC GGCCGGCGAC CGCGAACGTG
GACGACGTCG CCGGCGCTAA GGCGTCGCCG GAGTGCGCCG CCGCGGTGAA GACGCTGCGG
ATGTTCGCCC TGGGGTCGCT CAACGACGCG GCGAAGTCGG GCAAGGCGTA CATGGAGAAG
GCCCATCCCG GCCTGACCGT CGAGCTCACG GCCGACGCGA CCGGCTACCC CCAGCTCGTC
CAGCAGATCA GCGCGGACCG GGCCGCCGGG CGCCCGGCGG ACGTCGCGGT CGCCGGCTTC
GACCTGCTGC CGACCTTCGC CGACAAGCTC GGCGCGCAGC CGCTGTCGCC CCGGTTGCTG
CGGGCGTCCT ACGACCAGCG GTTCCTGCCG CTCGGCGAGT ACGGCGGCCG GCTCGTCGCG
GTGCCGCAGC AGGTGTCCAC GCTCGCACTC GTCTACAACG CGGACGTCCT GGCGAAGGCC
GGGGTCGACC CGAAGACGCT GGGCACGACC ACGGGGGTGC TCGCCGCGGC CGAGCGGATC
AGGAACTCCG GTCAGCAGAT CCAGCCGATC GACCTGCCGA CGGGCGGGTT CGCCCAGTGG
TACCTGACCA CGCTGGCCAG CTCGAAGAAC ACCCCCGCGA TGAAGGCGGA CGGCCAGCCC
GACCTGACCA GCCCGGCCGT CCGCGAGGCC GCCGCGTTCC TGGCCAAGGT GGGCACCTAC
GGAACACAGT CGAGCGACCC GACCACGCAG GGCCTGCTGC GCTTCGGCAT CCGGCACGAG
ACGGCGATCA GCGCGGTCAC CCTGCCGTCG CTGGCCGCGG GGCTGCGCTA CGTCCATGAC
CAGGGCGCGC AGGGCTTCAA GGTGGGTGTC GCCCCGTTCC CGACCCTGCC CGGGGGCACT
CAGCACCCCG TCGCGGGCGG CAACGGGCTG TCCGTACTGT CGACGGACCG CTGCCAGCGG
GAGATGGCCA CCGAGCTGGT CGTCGCGCTG CTCGCCCCGG ACGTGATCGC CGCCGGCACC
GAGGCGTTCA GCTTCCTGCC GGTCGACACC GAGGCCCGCA GGCAGCTCGC GCCGTTCTAC
CGGGAGTTCC CGGAGCTGAC CCAGTTCGAC GCGCTGATTC CGGATCTCGT CCAGGCGCCG
ACCTGGGGCG GTGAGCGCGG CGGCGAGGTC CACGACGCGC TGAACGACGA GGTGGTCGCA
ATCATGTCAG GAGCCGACCC CGGCACCACC CTCACCGAGG CCCAGCGGAA GATCGCCACC
CTGGTGAAGT GA
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| Protein sequence | MLGNVSEPRP RHLDPRGPGT RPGPGTRRAG SSPRRAGPLA ALLAGTVTVG LLAGCGGGSG
AATDPAESLR PTARPATANV DDVAGAKASP ECAAAVKTLR MFALGSLNDA AKSGKAYMEK
AHPGLTVELT ADATGYPQLV QQISADRAAG RPADVAVAGF DLLPTFADKL GAQPLSPRLL
RASYDQRFLP LGEYGGRLVA VPQQVSTLAL VYNADVLAKA GVDPKTLGTT TGVLAAAERI
RNSGQQIQPI DLPTGGFAQW YLTTLASSKN TPAMKADGQP DLTSPAVREA AAFLAKVGTY
GTQSSDPTTQ GLLRFGIRHE TAISAVTLPS LAAGLRYVHD QGAQGFKVGV APFPTLPGGT
QHPVAGGNGL SVLSTDRCQR EMATELVVAL LAPDVIAAGT EAFSFLPVDT EARRQLAPFY
REFPELTQFD ALIPDLVQAP TWGGERGGEV HDALNDEVVA IMSGADPGTT LTEAQRKIAT
LVK
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