| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0619 |
|---|
| Symbol | |
|---|
| ID | 5669036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 720249 |
|---|
| End bp | 721457 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641239546 |
|---|
| Product | amidohydrolase 2 |
|---|
| Protein accession | YP_001504984 |
|---|
| Protein GI | 158312476 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.6071 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCAT CACAGTCGCT GGACTGGCTG ATCTCGGTCG ACGACCACGT CCTGGAGCCG
CCGAACCTGT GGACCGACCG GCTCCCGGCC AAGGACCACG ACCGGGCTCC CCACATGGTG
ATCGACGACA CGGGAATGGA CTGCTGGGTC TACGACGGCA AGCGTTTCCC GAGCTCCGGG
CTGAGCGCCG TCGCCGGGAA GGAGAAGGAG GAGTTCAGCC CCGAGCCCCT CTCCTATGCC
GACATGCGGC CCGGTTGCTA CGACCCGCAG GCCCGCCTGG AGGACATGAA CCGGGCCGGC
ATCCTGGCCT CGCTGTGCTT CCCGACGGTG ACCCGGTTCT GCGGGCAGAT GTTCTCCGAG
GCGAGCGACC GCGAGTTCGG CCTGGTGTGC CTGAAGATCT ACAACGACTG GATGATCGAG
GAGTGGTGCG GCAGCGCTCC CGGCCGCTAC ATCCCGCTCA CCCTCATCCC GCTGTGGGAC
CCGCAGCTCG CGGTGAAGGA GCTCGAGCGC TGCGCGGCGA AGGGGTCCAC CACCTTCGCC
TTCTCGGAGA ACCCGGCCCC GCTGGGCCTG CCGACCATCC ACGACCGCGA CGGGTACTGG
GAGCCGGTGA TGGCTGCCGC GAACGACCTG GAGATGGTCG CGTCGATGCA CGTCGGCTCC
TCGTCGCAGG TGCCGAAGAT CGCTCCCGAC GCGCCGTTCA TGGCGAACCT GACCTGGGGC
GCGATGCGTA CCTCGGGCGC CATGCTCTCC TGGCTGTTCA GCGGGATGTT CCAGCGGTAC
CCGAAGCTGA AGATCGCGCT CTCGGAGGGC GAGATCGGCT GGATGCCGTA CTACCTGGAG
CGCGCCGAGC AGGTGATCGA CAAGCAGCGC CACTGGGTCA AGCGTGGTGT CCGCTTCAAC
GAGCACGCCG GGGCGGACGC CCTCGACCTG GACACCCTCG ACATCCGCGC CAGCTTCCGT
GAGCACGTCT TCGGTTGCTT CATCGACGAC GCGCACGGCA TCGCCAGCAT CGACGAGATC
GGCGAGGACA ACATCATGTG CGAGACGGAC TACCCGCACT CCGACTCGAC CTGGCCGAAC
TGCATCGACG TCGTCAGGAA CCGGATCGGC CACCTGTCGG AGGAGGTCCA GTACAAGATC
CTGCGCGGCA ACGCCGAGCG GCTGTACCGG TTCACCCCGG CCGAGCCGCC TGTGCTCGCG
AAGGCCTGA
|
|---|
| Protein sequence | MTSSQSLDWL ISVDDHVLEP PNLWTDRLPA KDHDRAPHMV IDDTGMDCWV YDGKRFPSSG
LSAVAGKEKE EFSPEPLSYA DMRPGCYDPQ ARLEDMNRAG ILASLCFPTV TRFCGQMFSE
ASDREFGLVC LKIYNDWMIE EWCGSAPGRY IPLTLIPLWD PQLAVKELER CAAKGSTTFA
FSENPAPLGL PTIHDRDGYW EPVMAAANDL EMVASMHVGS SSQVPKIAPD APFMANLTWG
AMRTSGAMLS WLFSGMFQRY PKLKIALSEG EIGWMPYYLE RAEQVIDKQR HWVKRGVRFN
EHAGADALDL DTLDIRASFR EHVFGCFIDD AHGIASIDEI GEDNIMCETD YPHSDSTWPN
CIDVVRNRIG HLSEEVQYKI LRGNAERLYR FTPAEPPVLA KA
|
|---|
| |