Gene Franean1_0608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0608 
Symbol 
ID5669025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp706383 
End bp707201 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content73% 
IMG OID641239535 
Productcarboxymethylenebutenolidase 
Protein accessionYP_001504973 
Protein GI158312465 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGATGG GGGCGCGCCG TCCGTGGTGC GTTCGCCATG ATGTCGTCAT GACGGTGGAG 
ACGGTCCGCC TGCGCCTCGG CCGCGGCGGG AACGGGGTCG GGAACGAGGA CCGGGGCTGC
GCGGACGCCC CTGGCGGCAC CGTTCCGGTG AGCGTCGCGG CGCCCGCTTC GGCAGTGTCG
CCGCGTGGCG GGGTCATCGT CATCCCCGAC GCGCGCGGAA TCACGAACTA TGTGCTCGCG
GTGTGCGAGC AGCTGTGCGC CGAAGGCTGG CTCGCGCTGA CGCCGCACCT CTACCACCGG
GACGGCCTGA CCGAGGTGCC GGTGGCCGAG GGTTCGTCGA AGATGCTGAC GCTGACCGCG
GCCGGCATTG CCGCCGACGT GGACGCCTGC CTGGAACACC TGGCCACGGT GGGGCTCCCG
CCGTCCCGGG CCGCGATCAT CGGGTTCTGC ATGGGCGGCA CGGCGGCGTT CCTCACCTCC
GTGCGGCACC GCCTCGGCGC GGCGGTCTCC TTCTACGGCG GCGCGGTCAG CACCCCGTAC
TGGACGGGCG CCCCGCCGCT GCTGGACGTC GCGGACCAGC TGCGCACGCC GTGGCTGGGG
CTGTACGGGG AGAACGACAC CTGGGTCACG CTGGACGAGA TCCGGTCGCT GCGCGCCGCT
GCCGCGCGGG CGCCGGTGCC GACCGAACTG ATCAGCTATC CAGGCGCCCA GCACGCCTTC
CACACACCCG AGCGGCCCTC CACCCACGAC CCGGTGGCCG CCCGCGACGC ATGGGCCCGG
ATGCTCCGCT GGCTGGAAAT CCACGTAGCC ACGACCTGA
 
Protein sequence
MPMGARRPWC VRHDVVMTVE TVRLRLGRGG NGVGNEDRGC ADAPGGTVPV SVAAPASAVS 
PRGGVIVIPD ARGITNYVLA VCEQLCAEGW LALTPHLYHR DGLTEVPVAE GSSKMLTLTA
AGIAADVDAC LEHLATVGLP PSRAAIIGFC MGGTAAFLTS VRHRLGAAVS FYGGAVSTPY
WTGAPPLLDV ADQLRTPWLG LYGENDTWVT LDEIRSLRAA AARAPVPTEL ISYPGAQHAF
HTPERPSTHD PVAARDAWAR MLRWLEIHVA TT