Gene Franean1_0593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0593 
Symbol 
ID5669010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp686811 
End bp687362 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content67% 
IMG OID641239520 
Producthypothetical protein 
Protein accessionYP_001504958 
Protein GI158312450 
COG category[S] Function unknown 
COG ID[COG4420] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCC ATCCTGACCA GCCCGCAGCT CCCCGGCCCA CGGCTTCCCC GCAGCCGCCG 
CATCCTCGGC TGCGCCCACA TCCCCGGGTC CGCAACGAGC GGGCCCTGGC CGCTCGGGCG
CGGACGTCCC AGGACAGGGT CTCGGACGCG ATCACGGCAT TCGCCGGGTC AATGCCCTTC
GTCTACCTGC ACGCCGCGTG GTTCACGATC TGGATCCTCC TGAACAAGGG GGCGTTCGGG
GACGCGGCCG TCTTCGACCC CTACCCGTTC GGCCTGCTCA CGATGATCGT CAGCCTCGAA
GCGATCTTCC TGTCGACGTT CGTGATGATC AGCCAGAACC GGCAGGCCGC GAGGGAGGAC
ATCCGGGCTG ATCTCGACTT CGAGACCAAT CTCCGCTCCG AGGTGTGGTC GGTGCACATC
GGCAAGGCGC TTGGGCTGGA CGCGGAGGCC ATCGAGCGGC ACGCCACGGA GGTCATCACT
GAAAGCAAGG CCATGATCAG CCGCGGGGAG ACGTCCTCGC GTCAGGTAAC ACCCCCGGCA
CAGAGTCAGT AG
 
Protein sequence
MSTHPDQPAA PRPTASPQPP HPRLRPHPRV RNERALAARA RTSQDRVSDA ITAFAGSMPF 
VYLHAAWFTI WILLNKGAFG DAAVFDPYPF GLLTMIVSLE AIFLSTFVMI SQNRQAARED
IRADLDFETN LRSEVWSVHI GKALGLDAEA IERHATEVIT ESKAMISRGE TSSRQVTPPA
QSQ