Gene Franean1_0582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0582 
Symbol 
ID5668999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp674429 
End bp674881 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content66% 
IMG OID641239509 
Productpyridoxamine 5'-phosphate oxidase-related FMN-binding 
Protein accessionYP_001504947 
Protein GI158312439 
COG category[R] General function prediction only 
COG ID[COG3467] Predicted flavin-nucleotide-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAGC AGCGCCGGGG CCGCAAGATC GCCATGAGCC GGGACGAGAT CGATGCGTTC 
CTCACCGAGG AGCGAACCTG CCGGGTGGCG ACGTCCAGCC CGAGCGGACC ACATCTGACT
CCGCTGTGGT TCGTGTGGGA CGGCGCCGCG CTGTGGCTCA ACTCGGTCGT GAAGAGCCAG
CGCTGGACCG ACATCGCCCG CGACCCGCGA GTGGCCGTGC TCATCGATGG CGGCCACGCC
TTCAACGAGC TACACGGGGT CGAGCTCCGC GGGAAGCTCG AAAGCGTCGG AGAAGCTCCC
CGGACCGGCA CCCCCGACCC GGACCTCGAA ACACCGGAAA AGCTCTTCGC CCAGAAATAC
ACCGGCCGCG ACGAAATGCA CTACGACGGC CGCCACGCCT GGCTGCGCCT CACCCCGGAG
AAAATCACCA GCTGGGACTT CCGAAAAATG TGA
 
Protein sequence
MKEQRRGRKI AMSRDEIDAF LTEERTCRVA TSSPSGPHLT PLWFVWDGAA LWLNSVVKSQ 
RWTDIARDPR VAVLIDGGHA FNELHGVELR GKLESVGEAP RTGTPDPDLE TPEKLFAQKY
TGRDEMHYDG RHAWLRLTPE KITSWDFRKM