Gene Franean1_0577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0577 
Symbol 
ID5668994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp668762 
End bp669523 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content70% 
IMG OID641239504 
Producthypothetical protein 
Protein accessionYP_001504942 
Protein GI158312434 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.448696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGA CCTTCGCCAC CGAGCACACC CCCGGCCGGG TCAACGAGGA CGCGGTCGCC 
GTCGGCGACG GCTGGGCGTT CATCCTCGAC GGCGCGACCG CCCGTGCCGG TGTGGTCTCC
GGGTGCGTGC ACGACGTCCG CTGGCTCGCC AGCACCCTCG CCGGGGAGCT CGCCCAACGG
CTACTCAGCT CGCAGCAGAC TCTCCCAGCT CTCCCCGACC TGCTTGCCGA GTCCATCCAG
GCAACCTGCC GCCAGCACGG CCCCGACTGC GACCTGTCGA ACCCCAACAG CCCCAGCTCT
ACCGCCGTCA TCGCACGGTG GACATCCGAC GAGTTCGAAT ACCTCGTCCT TGCCGACTCG
CCGCTGATCC TCGACCTCGG CAGAACCATC CGCCCGATCA TCGACGACCG GATAGCGCAC
CTGCCGGACT ACTCGGCAGA CGGGGTGGCC CGTTCCCGGA ACCAGCCGGG CGGGTTCTGG
GTGGCTTCCA CCAACCCTGA CGCCGCATAT CAGGCCGTCA CCGGTTCGGT GCCGGCTGAT
GAGGTCCACC GCGCGGCCCT GCTGTCGGAC GGCGCGTCCC GGCTCGTCGA ACAGTTCGGC
GTGCTGGACT GGCGGGGCCT GGTGGATCTT CTGGACAAGT CGGGGCCTGC CGAGTTGATT
CGCCGGACCC GCGCGGCGGA GCGCGCCGAG GCACCCGAGA TGGCTGCACG CCGCCAGGAG
AAGCGCCACG ATGACGCGAC CGCCATCCTA CTCCGCAGGT AG
 
Protein sequence
MRATFATEHT PGRVNEDAVA VGDGWAFILD GATARAGVVS GCVHDVRWLA STLAGELAQR 
LLSSQQTLPA LPDLLAESIQ ATCRQHGPDC DLSNPNSPSS TAVIARWTSD EFEYLVLADS
PLILDLGRTI RPIIDDRIAH LPDYSADGVA RSRNQPGGFW VASTNPDAAY QAVTGSVPAD
EVHRAALLSD GASRLVEQFG VLDWRGLVDL LDKSGPAELI RRTRAAERAE APEMAARRQE
KRHDDATAIL LRR