| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0561 |
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| Symbol | |
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| ID | 5668978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 645162 |
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| End bp | 646802 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641239488 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001504926 |
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| Protein GI | 158312418 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGACG CAGCCATAGC GCCGGCCGAG CAACCGCGGG CGGCGCTGAG CCGTGGACGT
GCGGGCCGCG GGTTCTGGTG GGCGGTGACG ATCTGTCTGC TGCTGGTCGT TGCCTCAGCG
ATCGTCGCGG TGATTCTCCC TGACCGTGCG GCACTACTCA CCATCCGCCT GGCCATGATG
TTATGTCTGT TGCTGGGTGG TGTGACCTGT GTGGTGACCG GGCTGCGACG GGGTGGTGCG
GATCGGGCGT GGCGGTTACT GGTCGCGGTG ATGGTGCTGA GTATCTGTGC CGGGTCGGCC
GCGATATTCC TGGACACGGT CGCGGGAGCT CCGCCGGTTC CGCGGCAGAC GCCAGTGTCG
CTGATCTACC TGATCCCGCA GGCGTTCGGC CTGGCCGGTG TGCTGCGCTA CCCGTCGGAC
CCGCTCGACG GGTCGTCACG GGAGCCCGGG CGGGGCCGGG ACCGCCACTG GTACGTGATC
ACGATTCTGG ACGGTCTGAT CGTGGTCGGC GCGATTACGT TGCTGGCCTG GATCGCCGTT
CTCGAGGAAG CGGTCGAGGG GAAGGGCCCG CTGGCCGCCG GACCCATCTA CTCGATCATC
CTTGCAGCAG CCAGCCTGGT CGTCACGGTC GCCGTGTTCC TGGTAGCCGT GTTCCGCCAG
CCACGCCCAG GGCTCGGCCT GGAGCTGGGT CTACTCACCC TGGGTCTACT CACCGTCACC
GTCTCGATCA TCTGTTACAC GGCCGTGGTC GTACGTGGTC TGCGTGACGT CCCGCGGCTG
GTCGACCTCA TCCAGCTCGC AGGTCCGCTG TTCATCGGGC TCGCGGCACT CTCGCCCGAC
ACCTCACAGT CCACGCGGAA TGCCGGCCCT GATGCCGACA GGCCGTTCGT CCCGGCGCGG
CGCCGCTGGT GGCACGCGGT CCTGCCATAC CTGCCGTTGA CCGCAGCCGG TATCGCGACG
GTGATCGAGG CCTCCGGTGG GGACATCGCC CGCCAGGAGG AGGTCTGGGC GATGCTGGCC
CTGCTGCTGA TCGCACTGGT CCGGCAGATG GTCACGATGG CCGACAACAT CCGCCTCCTC
AGCCAGGTCG AGGAGAAACA GCACGAACTG CGATACCAGG CGTTCCACGA CCCGCTCACC
GGGCTGGCGA ACCGCACCCT GTTCATCGAC CGGCTCGCGC TGGCGCTGCG CCACCGCGAT
CAGCCCGCCG GGCGGCTCGC GGTGCTGTTC TGCGACCTCG ACAACTTCAA ACGGGTCAAC
GACGCCGTCG GCCACGCAGC CGGTGACGAC CTTCTGCGGA TCACCGCGCG GCGCCTCGTC
AACAACGTGC GGCCCTCGGA CACAGTCGCC CGTCTCGGTG GCGACGAGTT CGCGATCATC
CTCGACCCAG TCGTCGAAGA CCCCGAAATG GTCGGACGGC GCCTCGCCGC GTCGGTACGG
GCACCGATCG ACCTCGAGGG CACCACCTAC ACCATCGCCA CCAGCACCGG ACTCGTCGTC
GTCGACCCGG CCAGCGAACC CCCCACCGCT GAAACCCTGC TCCACCGCGC CGACCTCGCG
ATGTACGCGG CAAAGGCCCG ACGAACAGGA GACCCGACGG CCTACACCCC GGACCTTGCG
CCGGGACGCC CCACACTTTG A
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| Protein sequence | MGDAAIAPAE QPRAALSRGR AGRGFWWAVT ICLLLVVASA IVAVILPDRA ALLTIRLAMM
LCLLLGGVTC VVTGLRRGGA DRAWRLLVAV MVLSICAGSA AIFLDTVAGA PPVPRQTPVS
LIYLIPQAFG LAGVLRYPSD PLDGSSREPG RGRDRHWYVI TILDGLIVVG AITLLAWIAV
LEEAVEGKGP LAAGPIYSII LAAASLVVTV AVFLVAVFRQ PRPGLGLELG LLTLGLLTVT
VSIICYTAVV VRGLRDVPRL VDLIQLAGPL FIGLAALSPD TSQSTRNAGP DADRPFVPAR
RRWWHAVLPY LPLTAAGIAT VIEASGGDIA RQEEVWAMLA LLLIALVRQM VTMADNIRLL
SQVEEKQHEL RYQAFHDPLT GLANRTLFID RLALALRHRD QPAGRLAVLF CDLDNFKRVN
DAVGHAAGDD LLRITARRLV NNVRPSDTVA RLGGDEFAII LDPVVEDPEM VGRRLAASVR
APIDLEGTTY TIATSTGLVV VDPASEPPTA ETLLHRADLA MYAAKARRTG DPTAYTPDLA
PGRPTL
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