Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0558 |
Symbol | |
ID | 5668975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 642386 |
End bp | 643735 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641239485 |
Product | transposase |
Protein accession | YP_001504923 |
Protein GI | 158312415 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5421] Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGATGA ACCTGGGCCG GGTCGACCGG GTCGACATGG ACGGGCTGCT GCGGCTGGCC GCCTCGATCC GGGCACACTT CGGCGACGGC GGGCCGGACG CGGCCGGCTC CGGCGACGCG GGCCTGGCCG CGGGCACAGG GCCTATGGAG GTCGTCGACG CCCGCCCCGT CGGCGCGACG TGGCTACTCG ACGGGCTGTG GCGTGAGCTC GGCGTGGCCG CCGCACTGGA GAAGGGGGTG GCGGACCGCA GGTTCACCAC CGCGGTGGAG CGGGTGCTGT TCGCGCTCGT GGCGAACCGG GCGGTCGAGC CGATGTCGAA GCTGTCGGCG GCCGAGTGGG CGAGCGAGGA CGTCGTCGTC CCCGGCCTGA ACAGCATGGA CGACGACCAG GCGTACCGGG CGATGGACCT GCTCGTGGAG GCCGACGTGG CAGGCGCAGT GCAGGAGGCG GTGTTCTTCT CCGTCGCGCA CTTGCTCAAC CTCGAGGCGG ACCTGCTGTT CTTCGACACG ACCTCGACCT ACTTCGAACG CGACACCGAG GAGGACGACC AGGCCGGTGC CGACGGCGAG GTCAGCCCCG GGTTCCGCAA GTACGGCAAG AGCAAGGACC ACCGAGACGA CCTGCCCCAG GTCGTGATCG GGCTGGCCGT CACCCGGGAG GGGATCCCGG TGCGGGTGTG GTGCTGGCCG GGCAACACCT CCGACCAGAC TGTGCTCGCC CAGGTCAAAG ACGACCTCCG CTCCTGGAAG TTGGGCCGGG TCGTCACCGT CGTCGACCGC GGCTTCTCCT CGGCGGCGAA CCTGGCCTAC CTGCGCCGCG CCGGCGGGCA CTACCTCGCC GGGATGCGGA TGCGCGATGG CAACCCGCTC GTGGACACGG TGCTCGCCCA CCAGGGCCGC TACCAGACCG TCCGGGACAA CCTGCGCGTC AAGGAGATCA AGCTGCCCGA GGCCGGTGAC ACCCGGTTCG TGCTCTGCTA CAACCCCGAC GAGGCGGTCT GTGACCAGGC GAAACGCGAG GCCGCCGTCC AACGGGTCGA AGACGAACTC GCCCGGGTCC GCGACCAGCG CAAGCGGGAC CGCGACCGGC AGCTCACCCC CGCCGCCCGC GAACGGGTCG AAGCCGCGCA CCTGCGCGCC GAGTGCGCGC TGCGCGACCA CCCGAGCCTG GGCCGCTGGG TCCGCCAGAC CCCGACCGGC CGCCTTGCCC TCGACCGGGC GAAAGTGAAA GCCGAAGCCG GCTGGACGGC AAGTACCTGC TCGCCACCTC CGACCCGGAC CTGTCCGCCG AAGACGCCGC CCTGGGCTAC AAGAACCTCC TCGAAGCCGA ACGCGGCTTC CGTGACATGA
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Protein sequence | MLMNLGRVDR VDMDGLLRLA ASIRAHFGDG GPDAAGSGDA GLAAGTGPME VVDARPVGAT WLLDGLWREL GVAAALEKGV ADRRFTTAVE RVLFALVANR AVEPMSKLSA AEWASEDVVV PGLNSMDDDQ AYRAMDLLVE ADVAGAVQEA VFFSVAHLLN LEADLLFFDT TSTYFERDTE EDDQAGADGE VSPGFRKYGK SKDHRDDLPQ VVIGLAVTRE GIPVRVWCWP GNTSDQTVLA QVKDDLRSWK LGRVVTVVDR GFSSAANLAY LRRAGGHYLA GMRMRDGNPL VDTVLAHQGR YQTVRDNLRV KEIKLPEAGD TRFVLCYNPD EAVCDQAKRE AAVQRVEDEL ARVRDQRKRD RDRQLTPAAR ERVEAAHLRA ECALRDHPSL GRWVRQTPTG RLALDRAKVK AEAGWTASTC SPPPTRTCPP KTPPWATRTS SKPNAASVT
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