| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0548 |
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| Symbol | |
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| ID | 5668965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 634760 |
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| End bp | 636262 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641239475 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001504913 |
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| Protein GI | 158312405 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAATT CACCGACTCG GTCGCCAGCG CGGTCGGGAG GCAGGCTCGC ACTAATCGCG
TTTGCCCAGC TCATCATCGC ACTTGACTAC AACATCGTGT ACGTGGCGCT GCCCGAGATC
GGCGCCGACC TCGACTTCTC GGCCCAGTCG CTGCAATGGG TGGTGAGTGC CTACGCCGTC
GGCTTCGGTG GCCTGCTCCT GTTCGGCGGC CGCGCGGTCG ACCGGCTCGG GGCACGCCGG
ATCTTCCTGG TCGCCGTCGC CATCTACGGC GTCTCGTCCC TCGCCGGCGG GCTCGCCCCC
GAACCTGGGC TGCTCGTGGC CGCGCGTGCC CTGCAGGGCA TCGGCGGAGC GCTGCTCTTT
CCCGCCATCC TCACGCTGAT CTACAGCGGC TTCGTCGAGG GAGCCGAGCG CAACCGCGCC
CTGGCCGTCT GGGGCGCCGT CGGCAGCGGC GGCCTCGCCG CCGGCTCCCT GCTCGGCGGT
CTGTTCACCG ACTGGTGGGG CTGGGAGTCC GTCCTCTTCG TCAACGTCCC GCTCGCGCTG
ATCGCCCTGC TGGCCGCGCC GCGACTGCTG CCGGCCGACG CGCCTGTCAA GCGCGGCGTC
AAGGCGTTCG ATGTGCCCGG CGCACTGCTT GCCACCGCAG GCTCCTCGCT CATCGTCTTC
GGCCTGGCCA GCGGCCCGGA GTCCGGTTGG ACCTCGGTCC GTGCGCTGGG CACCATTGTG
ATCGGCGGCG TGCTCCTCGT CGCCCTGCTG GTGACCGAAG CCCGCACCCC GGATGGGCTC
CTCCCGCTGC GGCTGGTGCG CACCCGCACC CTGGCCACGA CCATGGCGGT CGCCTTCCTC
TTCATGGGCA CCCTCGCCAC CGGCTATTAC GTGCTCACCA CCTACCTCCA GCCCGTCCTC
GGCTACAGTC CGACGGAGGC GGGCCTGGCA TTCCTTCCCG TCTGCGTGTT CTCCATGATC
GGAGGACCAG TGACGGCCGT CCTGCTCAAC AGATTCGGCA TCCGCGCCAC TCTGGCCGGG
GCTCTGATGA CCAACGGCGG CGGCGTGGCC CTCGTCTGCG TGGTCATGGC TGTGGATGGC
TCGTTCTGGT CGATGCTGCC CGGCATGGTC CTGTGGGGCC TGGGCGGCGG CGTCGGCTTC
ACCGCCACCT TCGCGGCGGC CGGCATGGGT GTCGCGCCGA TGGAACAGGG CGTCGCCTCG
GCGGTGGCCT CCACCTCCCA GCAGATCGGC GGCGCCGTGG GCCTGGCCGC CCTGATCGCG
GTCGCCAACC ACGGCCTCGA CTACAACGCG GTCCCCGGGC CCACGCTGGA CGAGATCGTT
GACGGCCTCC GGTGGGCCGG CGTCCTCGCC GGCGCTCTCT CGGTCGTCGG CGGCTTCGTC
GCCCTGATCC TCAAGAGCGG CAAGGCCACC GCTGCCGCAG TCGGGGAAGA ACCTGCTGGG
GATGAAGATG AACAGGTGAC CGCAAGCGGC ACCGCCGACG AAGCGATCGT CACCGCCCAG
TAA
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| Protein sequence | MTNSPTRSPA RSGGRLALIA FAQLIIALDY NIVYVALPEI GADLDFSAQS LQWVVSAYAV
GFGGLLLFGG RAVDRLGARR IFLVAVAIYG VSSLAGGLAP EPGLLVAARA LQGIGGALLF
PAILTLIYSG FVEGAERNRA LAVWGAVGSG GLAAGSLLGG LFTDWWGWES VLFVNVPLAL
IALLAAPRLL PADAPVKRGV KAFDVPGALL ATAGSSLIVF GLASGPESGW TSVRALGTIV
IGGVLLVALL VTEARTPDGL LPLRLVRTRT LATTMAVAFL FMGTLATGYY VLTTYLQPVL
GYSPTEAGLA FLPVCVFSMI GGPVTAVLLN RFGIRATLAG ALMTNGGGVA LVCVVMAVDG
SFWSMLPGMV LWGLGGGVGF TATFAAAGMG VAPMEQGVAS AVASTSQQIG GAVGLAALIA
VANHGLDYNA VPGPTLDEIV DGLRWAGVLA GALSVVGGFV ALILKSGKAT AAAVGEEPAG
DEDEQVTASG TADEAIVTAQ
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