Gene Franean1_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0545 
Symbol 
ID5668962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp631927 
End bp632940 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content72% 
IMG OID641239472 
Productglycosyl transferase group 1 
Protein accessionYP_001504910 
Protein GI158312402 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGATCG CGATACTCGC GCCGGTCGCG TGGCGCACTC CGCCCCGGCA CTACGGCCCC 
TGGGAGCAGG TCGCCAGCAC CATCGCGGAG GGCCTGGTCG AGCACGGGGT CGACGTCACG
CTGTTCGCGA CGTTGGATTC GGTGACGGCC GGCGAGCTGG ACGGCGTGTG CCCGCACGGG
TACGCCGAGG ACCCATCCCT CGACGGCCGG GTGTGGGAGG CCCTCCACGT GGCCCACGCA
CTGGCCCGCT CCAGCGAGTT CGACCTCGTG CACAACCATC TCGACTGGCT GCCCCTGGCG
TTCGCGCCGA GCTTCCAGGC CCCCATGGTC ACGACGATCC ACGGTTTCTC CGATCCGCGG
ATCGTCCCCG CCTACGCGCG GGCGGCCTCG GCATACGTGT CGATCTCGGA CGCCGACCGC
AGCCCCGAGC TGAAGTACGT CTCGACTGTT CACCACGGCG TCGACCTGGA CGAGCTCCCG
TTCTCGGCAG CGGGCGGAGA CGACCTGGTC GTGCTCGGCC GGGTCCATCC CGACAAGGGC
ACCGCGGTCG CCGTCGATAT CGCCCGCCAC GCGGGGCGGC GCCTGGTGAT CTGCGGAATC
GTCCAGGACG AGCGGTACTT CGCCGAGCAG GTGCTCCCGC ACGTCGACGG GGACCGGGTC
CGTTACCTCG GCTCGGTGGG ACCGGCCCAG CGGGCCGAGG TCCTGGGCTC AGCCGCGGCG
CTGTTGCATC CGATCGCGTT CGATGAGCCG TTCGGGCTGG CCGTCGTCGA GGCGATGGCC
TGCGGCACGC CGGTCGTCGC CTACCCACGC GGAGCGATGC CGGAGGTGGT CGACGAGGGG
GTGACCGGCT TCCTGGTGGA CGGGCCGGTG GCCGCGGCGG CCGCTGTGGA TCGCGCCGCG
GCCCTTGACC GCGCCGCCTG CCGGGCCATG GCACGGCGGA GGTTCTCCAC CGCGCGCATG
GTCGCCGACT ATCTCGCCGT CTACGCGGGC GTTCTCGCCG ACCCTGTCCT CTGA
 
Protein sequence
MRIAILAPVA WRTPPRHYGP WEQVASTIAE GLVEHGVDVT LFATLDSVTA GELDGVCPHG 
YAEDPSLDGR VWEALHVAHA LARSSEFDLV HNHLDWLPLA FAPSFQAPMV TTIHGFSDPR
IVPAYARAAS AYVSISDADR SPELKYVSTV HHGVDLDELP FSAAGGDDLV VLGRVHPDKG
TAVAVDIARH AGRRLVICGI VQDERYFAEQ VLPHVDGDRV RYLGSVGPAQ RAEVLGSAAA
LLHPIAFDEP FGLAVVEAMA CGTPVVAYPR GAMPEVVDEG VTGFLVDGPV AAAAAVDRAA
ALDRAACRAM ARRRFSTARM VADYLAVYAG VLADPVL