Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0541 |
Symbol | |
ID | 5668958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 626542 |
End bp | 627879 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641239468 |
Product | protein serine phosphatase with GAF(s) sensor(s) |
Protein accession | YP_001504906 |
Protein GI | 158312398 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2203] FOG: GAF domain [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATAATG CGCCGGCGCC GGAAGGGACC GGGCCGGCAC GTGACGCGGG CCCCGACCAG GCTGCCTCGG TATTGCTCCG CGCCGAGCCG GAGGAGCCCT TCGACCGGCT GACCCGCCTG GCGGCAGTCA TGCTCGGCGC CCCGTTCGCC TTCGTCATGG CGATGGACGA CGGGCGTTCC TACTGGAAGT CCCGTGCGGG TACGGCGGCG GGCGACCTCA CCGGTCGGCA GATCGCAGCG GCAGACAGCC TCTGCCGCCT GGCGGTCGGC ACGGGTCTGC CGCTGGTCGT GCCCGATGCC GGCCGCGACG ATCGCGTCCG GGGCGATTCG CTCGTCCGGT CGGCCGGTAT CAGGGCATGG GCCAGCTTCC CGCTCCGCGA TCCGAGCGGC CGCACGCTCG GTGCCTTCGG AGCGGCCGAC GTCCGCCCCC GGCTCTGGAC GGCCCGTGAC CTCGAGCTGC TGGAGACCCT CGCCCAGGCC GTGTCGGGCG AGATCGCGCT GCGTCACGTC GCGGCGGCCG CGACCGCGCT GGCCCGGACT CTCCAGCAGA GCCTCCTCCC CCCGGAGGTT CCGGAGATCC CCGGCCTGGA GGTCTCGGCC CGTTACCGCC CGGCGGGCGA AGGCGCCGAG GTCCTGGGCG ATTTCTTCGA CGTGTTCCAG ACCGGCCGTA CCAGTTTCGG CGTGGTTCTG GGCGATGTCG CCGGCAAGGG GGTCGAGGCG GCCAAGGTGA CCGCGCTGGC GCACTACACC ATCCGGGCGG CGGCGAGTCG CACCCGTGAT CCGGCCGCCA TTCTGAACCA GCTCAACCGG GCGCTGCTCA CCCAACATCC CGACAGCGAA CGGTTCCTCA CCGTCGCATA CATGGCCGTG GACCGGTCCC GGCGAAATCG GACCCTGGCC CTCTGTTCGG CCGGGCACAC TCCCGTTCTG CTCCGTGGGC GCGACGGCAC GGTGACCCCC ATCGGCTCCC ACGGCCTGGT GCTCGGCGTC TTCGAGGACC CGGAGCTCAC CACCAGCCGG CCGAGATTCG GTCCCGGTGA CACCATCCTG CTCTACACGG ACGGCGTCAC CGAGGCCCGC CGTGGGAACG ACCAGTACGG CGATGATCGG CTGCGGGCGC TGCTCGCGGC CACCGATCCG GCCGCCGGCC GCCTCACCGC GACGATCGAG GCGGCGGTGC TTGATTTTGC CGACGGGCCG CCCCAGGACG ATATTGCCAT CCTCGCAATC CACTTCCCGG ATATCTCGTC CGTGGCGATG AAAACGGTCC GTTCGAGGCT GCGGTCCCGG CGGCGACCAC GGCGGCCGTT CACGCGCCGT GGCACGCCGA CCGTGTGA
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Protein sequence | MDNAPAPEGT GPARDAGPDQ AASVLLRAEP EEPFDRLTRL AAVMLGAPFA FVMAMDDGRS YWKSRAGTAA GDLTGRQIAA ADSLCRLAVG TGLPLVVPDA GRDDRVRGDS LVRSAGIRAW ASFPLRDPSG RTLGAFGAAD VRPRLWTARD LELLETLAQA VSGEIALRHV AAAATALART LQQSLLPPEV PEIPGLEVSA RYRPAGEGAE VLGDFFDVFQ TGRTSFGVVL GDVAGKGVEA AKVTALAHYT IRAAASRTRD PAAILNQLNR ALLTQHPDSE RFLTVAYMAV DRSRRNRTLA LCSAGHTPVL LRGRDGTVTP IGSHGLVLGV FEDPELTTSR PRFGPGDTIL LYTDGVTEAR RGNDQYGDDR LRALLAATDP AAGRLTATIE AAVLDFADGP PQDDIAILAI HFPDISSVAM KTVRSRLRSR RRPRRPFTRR GTPTV
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