| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0530 |
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| Symbol | |
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| ID | 5668948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 618121 |
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| End bp | 618954 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641239458 |
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| Product | ABC transporter related |
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| Protein accession | YP_001504896 |
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| Protein GI | 158312388 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.103758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCGG CGGTGGCGCT GCGCGGCGTC AGCAAGGTCT ACGGCCGACG GACCGCCGCC
GTGACGGCGC TCGACGACGT CACGCTCGCC TTCGTCTGCG GCACCTTCAC CGCGGTGATG
GGTCCGTCGG GCTCGGGCAA GTCGACGCTG CTGCAGTGCG CGGCGGGTCT GGACCGGCCG
ACGGCGGGCG AGGTCTTCCT CGACGGCGAG AACCTGGCCC GGCTGAGCGA GAACGCGCTG
ACCGTGCTGC GCCGGGACCG GGTCGGCTTC GTCTTCCAGG CCTTCAACCT GGTGCCGTCC
CTGACCGCCG AGCTGAACGT GGCCTTGCCA CTGCGGCTGG CCGGACGGCG GCCGCGCCGG
CGCGAGGTCC GGGAGGTGCT CGAGGCGGTG GGCCTGGCCG ACCGGGGCCG GCGCCGGCCG
GCGGAGCTGT CGGGCGGCCA GCAGCAGCGG GTGGCGATCG CGCGGGCGCT GGTGACCCGT
CCGTCGGTGC TGTTCGCCGA CGAGCCCACC GGCGCGCTGG ACTCGACGAC CGGCCGCGAG
GTGCTGACGT TGCTGCGCGG ACTGGTCGAC CGGGACGGTC AGACCATCGT GATGGTGACG
CACGACCCGG TCGCCGCCTC CCACGCGGAC CGGGTGGTGT TCCTGGCCGA CGGTCGGCCC
GCGGGCGAGC TGCGCGATCC GACTCCGCGG ACGGTCGCCG CCCGGCTGGC CGGCCTCGAG
CCCGTGGCCG AGGCGGCCGA GGCGGCCGAG GCCACGGCAG CGGCCGTGAC GCGCGCCAGA
GCGGGTGAGC CGCCGAGCGG GCGTCTGACC GGGCCGGTGG GTGAGCGGCC ATGA
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| Protein sequence | MTAAVALRGV SKVYGRRTAA VTALDDVTLA FVCGTFTAVM GPSGSGKSTL LQCAAGLDRP
TAGEVFLDGE NLARLSENAL TVLRRDRVGF VFQAFNLVPS LTAELNVALP LRLAGRRPRR
REVREVLEAV GLADRGRRRP AELSGGQQQR VAIARALVTR PSVLFADEPT GALDSTTGRE
VLTLLRGLVD RDGQTIVMVT HDPVAASHAD RVVFLADGRP AGELRDPTPR TVAARLAGLE
PVAEAAEAAE ATAAAVTRAR AGEPPSGRLT GPVGERP
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