| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0526 |
|---|
| Symbol | |
|---|
| ID | 5668944 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 613260 |
|---|
| End bp | 613889 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641239454 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001504892 |
|---|
| Protein GI | 158312384 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTGGTGCC CCGGCGGGGC AGGTGTTCTT CCACGTGGTG ATGCGCCGCA ACGCCACCCG
CGAAATCGTC CAGGTCAACT TCCAGACCCA CACCGGGCGA ACATGGGCGG TGTTCGGGAA
CCACTGGCCG TCCCGGTCCG GGGGCAGTAC GAGTCCGCCG GCTACCGGGC CATCGCCGGG
GAGACCCTGG CCTACTTCCA CCAGCGGGTC CGCGAGGAAC ACGGCCAGGA CACCGCCGCG
CTGGCGATGG GCGACTTCAA CGACGAACCG TTCGACACCT CCCTCGTCGC CCACGCCCTC
TCGACCCGGC AGGCCACCCG GGTGATCAAC GCGGACACGC CGCGGTTCTG GAACCTGATG
TGGCCCGCCG CCGGCGCCCC GGGGGGCACG TTCTACTTCC AGAACGAACC GAACCTGCTC
GACCAGTTCC TCGTCAACGC GACCATGGCC CGCCCCACCA GCCCCCTGCA CGCCAACCCC
GACAGCGTGC AGATCCTGCG CTTCCCCGAG CTGGTCCACA CCGGCGACTA CCCGCGGCCC
CGTCCCTTCG GCGGCATGGG CGCCGCCGTC GATGAGACCG GCTACTCCGA CCACTTCCCC
ATCGCCATGA CCGTCACCGA AACCGACTAA
|
|---|
| Protein sequence | MWCPGGAGVL PRGDAPQRHP RNRPGQLPDP HRANMGGVRE PLAVPVRGQY ESAGYRAIAG
ETLAYFHQRV REEHGQDTAA LAMGDFNDEP FDTSLVAHAL STRQATRVIN ADTPRFWNLM
WPAAGAPGGT FYFQNEPNLL DQFLVNATMA RPTSPLHANP DSVQILRFPE LVHTGDYPRP
RPFGGMGAAV DETGYSDHFP IAMTVTETD
|
|---|
| |