| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0510 |
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| Symbol | |
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| ID | 5668929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 593665 |
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| End bp | 597030 |
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| Gene Length | 3366 bp |
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| Protein Length | 1121 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641239439 |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_001504877 |
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| Protein GI | 158312369 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.294056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTTTGG TGGGCGGATT CTGGTGTAGG TGGGCCGGAT CCTTGTTCTG GCGGGTTACC
TCCGGTGACG ACTGGAGATG GATTGGTCGT AGACCGCGTG TCCGGGGCTG GGTGCCCGCG
CAAGGCGGAC CAGTGGTGGA GCCAGGTTGT CGCGGCGTTC TGTCGGCTGC GTCGACCTTC
TCCTGGTCGG TCTGTGCAGT CCGGTCGGAG GTGGTCCAAG GACCGAAGCC AGGGAGCCGG
GATGGCACTG ACTGCTCGGC GGAGCGCCGT AGGCTGCGCA GCGCCGATGG GGGGGCTGAG
GTGAAGGGCC GTGGAGCATC TACCGGGGGC CGTGAATTCT TCTGCGTGTT GTCACTGCTC
AGCACCGGGT TCCTGTTGCT GCTGGCGATG GTGCCCGGTT CGCCGGGCTA TCTGCGCCCG
ACCGTCGTGG TCGCCGTCGG GCTCGGCGTC GTGACCGTAG CCGCCGTGCT TGCTGTTCCG
GCTTCGCGTC GCCGTGAGAT GGCGCTGGTT TCCTCGGCGA TGATGACAAC GGCAGTTACG
ATCGCGCTGG TCGGCGCGGA GCGTGACGCG CTGGCGCTGA GCCTGTTGTT TTGGTTTCCG
TGGGCGGGCA GCTACGCGGG GCTCGTATGG CGTCGGTTCG GTGCCGTGAT GGGGCAGGCC
GCGCTCGTCG CAGCCGTCGG GTTGGGTGCG TTCAGCGCAC ACGGCCGGCT CGCGGCCTTC
CCTTTCGTCG GGGTCGGCTG CGCTTTGAGC GTGCTGGCCT GCGCCTATGT CACCTACGGG
TCCCTCCAAC GGGGGCGAGG CCCGTGCTTC TCCGACTCCG TGACGGATCT GACGAACCGC
GCAGGGTTGC TGCAGGCGGG CGATCCGGTC CTCTCCGAAA TCATGCTGGC CGGCCGCCAG
GCCCTACTGA TGATCGTCAA TATCGACCAC TTCAGGGAGA TCAACACCGC GCTTGGCTAC
GAGGCCGGCG ACGAGGTGCT CAGGATGTTC GCCCGCCGGC TTCGTTCTGT GAGGCCAGCC
CCCTCGTGCG TCGGTCGCCT CGGAGGGGAT GAGTTCGCGC TGGTGATGCC CGGTGCGTCG
CAGGTGGCCG ACGGGGTGCC TGCACCTGAG AGGACCGACT CCGCACCGGC TGATGTTGGC
CGTGCCGTCC TTGACCAGCT CGACGGGCGG CTACGGATCA GCGGAGTGGA CGTCGAGGTG
GAGGCGACCG CGGGTCTCGC GGTCGCGCCC TGGTGCGGCG ACCGGATCGC CACTCTCCTG
CCATGCGCCG ACGCGGCGCT GTCCGACGCC CGGCGCGGCG GTGAACGGGT CGGGGTGTGG
AGGGCCGAGA TGGTTGGGGT ACAACCCTGG GAACTGGCGC TGCACGCCCA GCTACGATCC
GCGATCACCC GCGGCGAGCT GGTCCTGCAC TACCAACCGA TGCAGGAGGC GGCGACCGGC
CGGATCGTCG ACGTCGAGGC GCTCCTGCGC TGGCGGCACC CCGACCGCGG GCTGCTACCC
CCCGGATCAT TCCTCCCGAT GGCCGAACGC TCCTCACTGA TCGTCGATCT GACCTGGTGG
GAACTTGATG AGGCGCTGCG CCAGTGCGCC CGGTGGAGAA CCGAGGGGCT GCGGATGCCC
GTCTCGGCGA ACCTGTCCGC CCGCATGCTC GTCGTCGACG AACTCCCACG TGTGGTCGCC
GAACGGCTAG CCGCCCACGA CCTCCCTGCG GACATGCTCA CCCTTGAGAT CACCGAGAGT
GCCCTGATCT CCCAGCCGGC CCGCGCCGCC GCGATGCTCA GCGAGCTGCG GATCACCGGG
GTGAAACTGT CGATGGACGA TTTCGGCACC GGCTACAACT CCATGGAGAT CCTCAAGGCG
CTGCCCTTCG ACGAAGTGAA GATCGACAGG GGGTTCGTCT CCGACGCCCG GCGTAGCCTG
CCCGACGCTG CGATCGTGCG GTCCGTCATC GACCTAGGCC ACCGGCTCGG GATGCGGGTC
GTCGGCGAGG GAGTCGAGGA CGAGCACAGC GAGCGGATGC TGACCGAGCT CGGCTGTGAC
CTCCTGCAAG GCGAGGCACT CTCACCACCC CTGCCAGCCC GCAAACTTCC CCCGCTGCTC
GCCAGCAAGC CGCGGGTGAC CAGCCGGTCC CGGGCCCCCG CCCCAACCTC GACCCCGACC
CGGGCCGCTG GGCTGCCCCA GAAGACACCG CCCGGAGCTC TCCAGGGCCA GGAATCCGCC
ATCGTCGGGG AGCACTCCGG AGAGCAGGCT GCCGCACAGG TCGGTGAGAC GGGCATCGAA
CAGCCGGCGT TCGCGGAGGC GACGACGCAG GCCAAGGCAC ACTGGACCAG AAGCGGGCTG
TCCGCGGCTG TTCCCGCCGA CGAGGAAGCC CGGCTGGCGG CACTGCGCGG CCACCATGTC
CTCGACACCC CGCCAGAACC GGAGTTCGAC GCCCTCGCCA CCCTTGCCGC CCAGATCGCC
GACTGCACCT ACGCCCACGT GGTGTTCGTC GACGCCGGGC GGGAGTGGTT CAAATCCTGT
CACGGCCTGC GGATCACCGA GCTCGGAGCC CGGGTGGGAG TGGCCTCCCA CACCGTCGCG
TCAGGGACAT ACCTCGAGGT CCCCGACGCG ACACGGGACC TCCGCTTCGC CCGCGTGGTC
AGATCCGATC CCAACCTCCC GGTGCGATTT TTCGCCGGGG TACCGCTGCG GACACCGGAA
GGGCACGTAC TCGGCGCCCT CTGCGTCTCC GACCGGCTGC CACGTCGACT GGCCCCCGGC
CAGCGACACG CGCTGCACCA GCTCGCCACC CAGACGATGC GCCTGCTTGA CGCGCGCAGG
GAACGACAGA CGACCGAAGA AATCACCACC GCACTGCACA CACTCGACCA GCTCTGGTAC
CCCGACGACC TTCCCACCGC GGCCACCCTG ACCGCCGACA TCATCCGCTC ACTAGCCGGC
GCGGACGCCG TCGCGGTGAT GCTCGCGGAG ATGCCCGGTT CGACGGTCTT CCACGCGGCC
GGCTCCTCGG TGGCCCCAGG CACCGAGCCA CTGCTCCGGG TAGGCATCCG GGCCACACCC
GATGACGAAG CCGCGCTCCG AGCGCTGTCC CATCTCAAAG ACGCGATCTT CATCCCGGAC
CCGGAGCGGA CTCCGCTCAT CCCGACCGAG ATGGTCCGCA AACTCAACAT CCGCTCCGCG
CTGGTCATCC CACTCCCCGG CGAAGGCGGG CTACTCGGCC TCATCACCGT CCGCTGGACA
CACCCCCTGA CCTGCGTGGA ACCATCGCTC CTGCAAGCGA TAACGCTGTT CGCCACATCG
GCCCGATACA CACTCCACCG CCTGCAGGCA GCCTGCCGAC GCCGAGGGGA GTGGCCTCCG
GCATGA
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| Protein sequence | MLLVGGFWCR WAGSLFWRVT SGDDWRWIGR RPRVRGWVPA QGGPVVEPGC RGVLSAASTF
SWSVCAVRSE VVQGPKPGSR DGTDCSAERR RLRSADGGAE VKGRGASTGG REFFCVLSLL
STGFLLLLAM VPGSPGYLRP TVVVAVGLGV VTVAAVLAVP ASRRREMALV SSAMMTTAVT
IALVGAERDA LALSLLFWFP WAGSYAGLVW RRFGAVMGQA ALVAAVGLGA FSAHGRLAAF
PFVGVGCALS VLACAYVTYG SLQRGRGPCF SDSVTDLTNR AGLLQAGDPV LSEIMLAGRQ
ALLMIVNIDH FREINTALGY EAGDEVLRMF ARRLRSVRPA PSCVGRLGGD EFALVMPGAS
QVADGVPAPE RTDSAPADVG RAVLDQLDGR LRISGVDVEV EATAGLAVAP WCGDRIATLL
PCADAALSDA RRGGERVGVW RAEMVGVQPW ELALHAQLRS AITRGELVLH YQPMQEAATG
RIVDVEALLR WRHPDRGLLP PGSFLPMAER SSLIVDLTWW ELDEALRQCA RWRTEGLRMP
VSANLSARML VVDELPRVVA ERLAAHDLPA DMLTLEITES ALISQPARAA AMLSELRITG
VKLSMDDFGT GYNSMEILKA LPFDEVKIDR GFVSDARRSL PDAAIVRSVI DLGHRLGMRV
VGEGVEDEHS ERMLTELGCD LLQGEALSPP LPARKLPPLL ASKPRVTSRS RAPAPTSTPT
RAAGLPQKTP PGALQGQESA IVGEHSGEQA AAQVGETGIE QPAFAEATTQ AKAHWTRSGL
SAAVPADEEA RLAALRGHHV LDTPPEPEFD ALATLAAQIA DCTYAHVVFV DAGREWFKSC
HGLRITELGA RVGVASHTVA SGTYLEVPDA TRDLRFARVV RSDPNLPVRF FAGVPLRTPE
GHVLGALCVS DRLPRRLAPG QRHALHQLAT QTMRLLDARR ERQTTEEITT ALHTLDQLWY
PDDLPTAATL TADIIRSLAG ADAVAVMLAE MPGSTVFHAA GSSVAPGTEP LLRVGIRATP
DDEAALRALS HLKDAIFIPD PERTPLIPTE MVRKLNIRSA LVIPLPGEGG LLGLITVRWT
HPLTCVEPSL LQAITLFATS ARYTLHRLQA ACRRRGEWPP A
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