Gene Franean1_0490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0490 
Symbol 
ID5668910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp572363 
End bp573112 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content70% 
IMG OID641239420 
Producthypothetical protein 
Protein accessionYP_001504858 
Protein GI158312350 
COG category[S] Function unknown 
COG ID[COG3339] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGACT GGCTTGTCGG CCTGGGGATC GCCGCCGGAT GCCTGGTGGC CAGCTGGGGG 
GTGCTCTTCC TACTCGCCCG GCGGCTGCCG CCCGGGGTCC TGCGAGACCT CGCCGCCTTC
ATCCCCGACT GCCTAACGAC AGTGCGCCGG CTCCGGAAGA ACCCCCAGGT ACCACGAAAA
GCAAAGATCG CCGTACTGAT CGCCGGGCTG TGGGTCGCCA GCCCCATCGA CCTGATCCCC
GAGTTCCTGC CCGTGATCGG CCCCCTCGAC GACATCGTCG TCGTGGCGCT CGCTCTGCGC
TACGCGGGCC GCCAGGTACC CCGCGACGTC CTGCTGGCCG CATGGCCGGG TCAGCCACGG
CTCCTCGAAC GCCTCCTCGG CCCCGCGCAC ACGTCACCAC CGGACTCAGC TGATGCGGCA
GCCGGCAACG GACCGACAGA AGTCGAACTG CTGGTCACAC CGGACTGCCC GCACCAAGGC
CCAGCCGCCG TACTGCTTCG CCAGGCCCTG AACGACATCG GCCTCACCAG CACCCGCATC
ACAACGACCG CGGTCACCGA CCAGCGGCAC GCCGAAGAAC TGGGCTTCGC CGGGTCACCC
ACAATCCGGA TCGCTGGGCG CGACCTGTTC GCCCAGCCCA GTCATGCCCC CACGCTGGCC
TGCCGGATCT ACCACACTCC CACCGGGCTC GCCGCCACCC CGGACCTCAG CGAGCTCCGC
CAGGCACTCC GACGCGCAAG CGGACGGTAA
 
Protein sequence
MRDWLVGLGI AAGCLVASWG VLFLLARRLP PGVLRDLAAF IPDCLTTVRR LRKNPQVPRK 
AKIAVLIAGL WVASPIDLIP EFLPVIGPLD DIVVVALALR YAGRQVPRDV LLAAWPGQPR
LLERLLGPAH TSPPDSADAA AGNGPTEVEL LVTPDCPHQG PAAVLLRQAL NDIGLTSTRI
TTTAVTDQRH AEELGFAGSP TIRIAGRDLF AQPSHAPTLA CRIYHTPTGL AATPDLSELR
QALRRASGR