| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0481 |
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| Symbol | |
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| ID | 5668901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 566755 |
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| End bp | 567525 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641239411 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001504849 |
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| Protein GI | 158312341 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGA CAAACGCCAT CGCCCAGGCC CAGCCGCGGG TCGCGCTCGT CACCGGCGGA
ACCACCGGAA TCGGCCTGGC CACGGCTCGG CTGCTGCATG CCGACGGGTT CGCCGTCGCG
ATCACCGGCC AGAACCCCGA GACACTCGCG GCGGCGCGGC ACGTGTTGCC CGATGACGTC
CTCGTCCAGC GCGCCGACGC CCGGGTCCTG GCGGACGCCG ACGCGCTCGC CGCCGAACTC
CGTGACCGGT TCGGGCACCT CGACGCGGTG TTCCTGAACG CCGCCGTCGC CCAGCCCTCG
TCGTTCAGCT CCGTCACCGA GGAATCGTAC AAAGAACACT TCGGAGTGAA CGTGAAAGGG
CAGTTCTTCA CGTTGCAGCG AGTGCTGCCG CTGCTCCGCG ACGGCGGTAC CGTAGTGTTC
AACAGCTCGC GACTGGTGGC CCGGTCGTTT CCTGGGATGT CGCTGTACGT TGCCACCAAG
GGAGCGGTGG CATCGATGGC TAGGGCGCTC GCCGTGGAAC TCGCCCCTCG GCGGATTCGG
GTCAACGTCG TCAGCCCTGG CCCGGTCGAC ACCCCGGCAC TGGCGAAACA AGGGCTGTCC
GCCGCAGAAC TGACCAGTCT CCGCACGACG CTGACGGCCA AGGTTCCGCT CGGCCGAATA
GCGTCGGACG AAGAAGTGGC CCATACCGTC GCTTTCCTGG TTTCGGACGC GGCCAGCTAT
CTCACCGGCG CCGACATCGT CGTCGACGGC GGGATGATGG CCAGCGTCTA A
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| Protein sequence | MTTTNAIAQA QPRVALVTGG TTGIGLATAR LLHADGFAVA ITGQNPETLA AARHVLPDDV
LVQRADARVL ADADALAAEL RDRFGHLDAV FLNAAVAQPS SFSSVTEESY KEHFGVNVKG
QFFTLQRVLP LLRDGGTVVF NSSRLVARSF PGMSLYVATK GAVASMARAL AVELAPRRIR
VNVVSPGPVD TPALAKQGLS AAELTSLRTT LTAKVPLGRI ASDEEVAHTV AFLVSDAASY
LTGADIVVDG GMMASV
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