| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0451 |
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| Symbol | |
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| ID | 5668873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 531590 |
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| End bp | 533383 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641239383 |
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| Product | ABC transporter related |
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| Protein accession | YP_001504821 |
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| Protein GI | 158312313 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCACGC CGGCATCAGG GACCGACACC ACCAAGCGCA GGTCGACGCT GCGCCGACTA
TGCAAGGACC CGCAGGCAGT CGTCACGTCG AGTGTCCTGC TGATCATCGC ACTGCTCGGC
GCGCTGGCTC CACTACTCAC GTCGCACGGC CCGAACGAAG CCTCGCTGGA TGCGATCGAC
GCCGACGTCA GCACCCCGGG CTACCCACTC GGTGGTGATC AGAGCGGTCG GGACATCTTT
GCGCGACTGC TCGGTTCCAT CAATACGAGC ATGGTCTCCG CCCTGATCGG AACGACTGTC
GCATTGACGA TCGGCGTCAC TGGTGGTCTC ATCGGCGGCT ACTTCGGGCA CCGGATCAGG
GGCTTCACCG AATGGGTGTT CAACCTGGTG ATGACCTTCC CGGGCCTACT GCTGTTGATC
ATTCTTATGC CTGTGACCAA AGGTGACTAC CGCATCACGA TGATGATCTT CGGGGTGTTG
CTGTCGCCCG GTGTCTACCG GATCGTGCGC AATCAGGTTC TGAGTGTGCG CAACGAGTTG
TTTGTCGACG CCGCGCGTGT CTCCGGGCTG TCCAGCCCGA GGATCCTCCG GCGGCACATC
CTCGCCGCGG TCCGCGGTCC CGTCATCATC GCCACCGCAT TCCTCTTAGG AGCCTCCATC
GGAGTGCAGG CGGGCTTGGC CTTCCTGGGC GTCGGACGGA GCTCAGTGCC CAGTTTCGGC
TCCATGATCG CCGCCGGGTT CGAGAGTCTG TACGTCGAAC CACTGCAAAT CGTGTGGCCC
AGCGTCATGC TCGGCCTCAT CACGGCCTCG CTGGTTCTGT TCGGCAACGC GGTGCGGGAC
ACGCTAGGAG CGTCGCGGCG CCGACCGCGC AAGATCCACC CATCCGCGCC GGCCCGGCCG
GAGAAACCCG ACCCGTCCGA CGATGCACCT CCCGGACTCC TGGAGGTGCG GAATTTGACG
ATCGCCTACC CCTCCCCGTC CGGCGAACCG CGCGAGGTGG TCCGTGGGGT CACCCTGAGC
CTGCAGCCGG GTGAAACCCT CGGCGTCGTC GGCGAGTCCA GCGCGGGCAA GACCCAGATC
GCTTTCGCTG CCCTCGGCGT GCTGCCGCCG GGTGCGACGA TCACCTGCGG GTCCATCACG
TTCGACGGCC GCGAACTGCT CGGGCGGACC GAGCGTGAGC TGCGCGGTAT CCGCGGCAGA
TCCATCGCGT ACGTGCCGCA GGAGCCGATG TCGAACCTCG ATCCCTGCAC CACCGTGGGG
GCGCAGCTCG TCGAGGGTGT ACAGGCGTCC ACGCCGATGG CGCGGCGCGC CGCCCGCGAG
CGGGTGCTCG CCCTGCTGGG CCGTGTCGGC ATCCCGGATC CGAAACGCAC CTTCAACTCC
TATCCACACC AAATCTCCGG TGGCATGGCG CAGCGCGTGC TCATCGCCGG TGCCGTGGCC
AGCCGACCTC GGATACTCAT CGCCGACGAG CCGACGACCG CGCTCGATGT CACGATCCAA
GCGGACATCC TCGACCTGCT GCGGGACCTC CAACAGGAAC TGAACATGGC CGTCTTGCTC
GTGACACACA ACTTCGGCGT GGTGGCCGAC CTGTGCGACC GCGTCGCCGT CATGCGAAGA
GGCGAGATCG TCGAGATGGG GACCGCGCTC GACATCCTTG GCGAACCGCA ACACGAGTAC
ACCCGGATGC TGCTCGCCTC CATCCTCGAT GGGAGCACAA CACGCACCGA CGCGCCGAGC
GGGGAAATAT CCGCCCGCGA CAGCGTGGCG GTGCAGGTCG GAGAAGCGCG ATGA
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| Protein sequence | MTTPASGTDT TKRRSTLRRL CKDPQAVVTS SVLLIIALLG ALAPLLTSHG PNEASLDAID
ADVSTPGYPL GGDQSGRDIF ARLLGSINTS MVSALIGTTV ALTIGVTGGL IGGYFGHRIR
GFTEWVFNLV MTFPGLLLLI ILMPVTKGDY RITMMIFGVL LSPGVYRIVR NQVLSVRNEL
FVDAARVSGL SSPRILRRHI LAAVRGPVII ATAFLLGASI GVQAGLAFLG VGRSSVPSFG
SMIAAGFESL YVEPLQIVWP SVMLGLITAS LVLFGNAVRD TLGASRRRPR KIHPSAPARP
EKPDPSDDAP PGLLEVRNLT IAYPSPSGEP REVVRGVTLS LQPGETLGVV GESSAGKTQI
AFAALGVLPP GATITCGSIT FDGRELLGRT ERELRGIRGR SIAYVPQEPM SNLDPCTTVG
AQLVEGVQAS TPMARRAARE RVLALLGRVG IPDPKRTFNS YPHQISGGMA QRVLIAGAVA
SRPRILIADE PTTALDVTIQ ADILDLLRDL QQELNMAVLL VTHNFGVVAD LCDRVAVMRR
GEIVEMGTAL DILGEPQHEY TRMLLASILD GSTTRTDAPS GEISARDSVA VQVGEAR
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