| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0450 |
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| Symbol | |
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| ID | 5668872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 530652 |
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| End bp | 531593 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641239382 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001504820 |
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| Protein GI | 158312312 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTAGCCT ATGTACTCCG GCGGCTCGGC GCAGGTGTGG TGCTCGCTCT CCTCGTCACA
TTGATCACGT TCTTCCTGCT GAGCCTTTCG TTCGACAGCG TGGTCAGGAG CCTCCTTGGC
CCCAGCGCGA CGCCCGAGAC GCTGCATGCA CGCAAAGCTC AGATGGGGCT CGATCGGCCG
GTCTTGGTCC AGTATCTCGA CTGGCTGGCC CACGCAGCGC GAGGCGACCT CGGCGTCTCG
TACTTCACCA GCGAGCCGGT CGTCCAGGCC GTGCCGACGC GGCTGGGCGT CACCCTGTCC
GTCATCGTCG TCGCACTGAT CCTCACGGCC CTCATCAGTG TCATGCTCGG TGTGCTGGCG
GCCAGCCGTG GTGGTGTCGT CGACCGCGTA GCCCAGGGAG CCTCGCTCGT CGGCCAGCTC
GTACCTCACA TGCTGATCGC GATCATCCTG GTCACCGTGC TCGCCATCAA CCTGAAGCTG
CTCCCCCCCA CCGGTTTCAC GCATCTCACC GACGACCCGG GCCGCTGGGC GGCCACCATC
ACCATTCCGG TGATCACCCT GACGGTGGCC AGTATCGCCA ATGCGACGGC GCAGGTCCGC
GGCGCCATGG TCGACGAGCT GAGCAAGGAC TACATCCGCA CCCTACGTAC CCGCGGAATC
TCGTCCCGGT CAATCCTGCT ACGCCACGCG CTACGAAACG CGGCGGGTCC CGCGCTCACC
GTGCTGTCCC TGGAATTCAT CACGATGTTC GGCGGCGTTC TCATCCTCGA GAACATCTTC
GCCCTGCCGG GCTTCGGAAC CTATGCGTTC AACGCCTCCC TGCAGGGCGA CGTCCCGATC
ATCATGGGAG TCACCCTGTT CGCGGTGCTG CTCATCGTCA CCGTCAACCT CGTCGTCGAC
CTCGTGAACG GATGGCTCAA CCCGAAGGCG AGAATCCATT GA
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| Protein sequence | MLAYVLRRLG AGVVLALLVT LITFFLLSLS FDSVVRSLLG PSATPETLHA RKAQMGLDRP
VLVQYLDWLA HAARGDLGVS YFTSEPVVQA VPTRLGVTLS VIVVALILTA LISVMLGVLA
ASRGGVVDRV AQGASLVGQL VPHMLIAIIL VTVLAINLKL LPPTGFTHLT DDPGRWAATI
TIPVITLTVA SIANATAQVR GAMVDELSKD YIRTLRTRGI SSRSILLRHA LRNAAGPALT
VLSLEFITMF GGVLILENIF ALPGFGTYAF NASLQGDVPI IMGVTLFAVL LIVTVNLVVD
LVNGWLNPKA RIH
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