Gene Franean1_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0400 
Symbol 
ID5668824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp479870 
End bp480388 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content68% 
IMG OID641239333 
Producthypothetical protein 
Protein accessionYP_001504772 
Protein GI158312264 
COG category[S] Function unknown 
COG ID[COG4933] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.496255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGGG ACGGCGCGCG GCAGCAGGGT CTGTTCGACG TCGCCGGTGA GGTGACGGCC 
GCCGAGCCGG TGTTGATGGC GTTGCACGCC GAGTACTACG AGCTGATCTG GCAGGGGTTG
AAGACGCACG AGTTCCGGCG CCGGTTCCTG GAGGGTCGTC CGGTTCGCTG GTTTGTGTAC
CTGAACGCGC CGGTGTCGCG GCTGGCGGCG GTCATCGATC TGGGACCGGC GGTGGTGGAT
GTGCCGGAGC GGGTCGCGGC GATCGCGGAG CGGGCCCGGG TGGGTAACGG CGCGAGCGTG
TTGGAGTACG TGCGGGACCT GGAGCGGGCC TTCGCGATTC CGATCTTGGG TGTTTCCGAG
TACTCGGGCC GGTCGGTGGA GGAGCTGCGG GCCGAGCTGG GCGGGTTCCA TCCGCCGCAG
GGTTATGTCC GGTTGCGGCA GCATCCGCAG CTGTTGACGG TGTGCGAGAA AATCACCACG
GAGAGCCCGC TGCGGGAGAT GTCCGTGCAT CATCACTGA
 
Protein sequence
MGGDGARQQG LFDVAGEVTA AEPVLMALHA EYYELIWQGL KTHEFRRRFL EGRPVRWFVY 
LNAPVSRLAA VIDLGPAVVD VPERVAAIAE RARVGNGASV LEYVRDLERA FAIPILGVSE
YSGRSVEELR AELGGFHPPQ GYVRLRQHPQ LLTVCEKITT ESPLREMSVH HH