Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0392 |
Symbol | |
ID | 5668816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 469585 |
End bp | 470178 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641239324 |
Product | protein of unknown function ATP binding |
Protein accession | YP_001504764 |
Protein GI | 158312256 |
COG category | [R] General function prediction only |
COG ID | [COG2229] Predicted GTPase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.494311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.506956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCTCAC CCGTCTCTAA GCGGGCGCCC ACCGCGGTCA AGGTTCTCGT TGCCGGTGGG TTCGGAGTAG GAAAAACGAC GTTCGTGGGG TCGGTGAGCG AGATCGAGCC GCTCACCACC GAGGCGGCGC TGACCAGCGC CAGCCTCGGC GTCGACGACA CCAGCGCCGT GCACGGCAAG ACGACCACCA CGGTCGCCAT GGACTTCGGC CGTCTCACGC TCAGCAACAA CATCATCCTT TACCTGTTCG GCACGCCCGG CCAGGACCGC TTCTGGTTCA TGTGGGACGA GCTCGTCCGC GGCGCGATCG GCGCGGTCGT TCTCGTCGAC ACCCGGCGGA TGGCAGACTC CTTTCCCGCC ATCGACTTCT TCGAGAACCG CCGGGTCCCG TTCCTGGTGG CCGTCAACCG GTTCGACGCG AACACCTACG AGTACCCGCT GCCCATGGTC CGCAACGCGG CGGACCTGGC GCCGCACCGG CCGCTGATGT ACTGCGACGC CCGGCGCCCG GACAGCGCGC AGACGACCCT GGTCCATCTT GTGCGCCACG CACTGGAACT GGCTCTCTCC GGCGACCTGC CGGACGAGCC ATGA
|
Protein sequence | MVSPVSKRAP TAVKVLVAGG FGVGKTTFVG SVSEIEPLTT EAALTSASLG VDDTSAVHGK TTTTVAMDFG RLTLSNNIIL YLFGTPGQDR FWFMWDELVR GAIGAVVLVD TRRMADSFPA IDFFENRRVP FLVAVNRFDA NTYEYPLPMV RNAADLAPHR PLMYCDARRP DSAQTTLVHL VRHALELALS GDLPDEP
|
| |