Gene Franean1_0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0392 
Symbol 
ID5668816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp469585 
End bp470178 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content67% 
IMG OID641239324 
Productprotein of unknown function ATP binding 
Protein accessionYP_001504764 
Protein GI158312256 
COG category[R] General function prediction only 
COG ID[COG2229] Predicted GTPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.494311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.506956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTCAC CCGTCTCTAA GCGGGCGCCC ACCGCGGTCA AGGTTCTCGT TGCCGGTGGG 
TTCGGAGTAG GAAAAACGAC GTTCGTGGGG TCGGTGAGCG AGATCGAGCC GCTCACCACC
GAGGCGGCGC TGACCAGCGC CAGCCTCGGC GTCGACGACA CCAGCGCCGT GCACGGCAAG
ACGACCACCA CGGTCGCCAT GGACTTCGGC CGTCTCACGC TCAGCAACAA CATCATCCTT
TACCTGTTCG GCACGCCCGG CCAGGACCGC TTCTGGTTCA TGTGGGACGA GCTCGTCCGC
GGCGCGATCG GCGCGGTCGT TCTCGTCGAC ACCCGGCGGA TGGCAGACTC CTTTCCCGCC
ATCGACTTCT TCGAGAACCG CCGGGTCCCG TTCCTGGTGG CCGTCAACCG GTTCGACGCG
AACACCTACG AGTACCCGCT GCCCATGGTC CGCAACGCGG CGGACCTGGC GCCGCACCGG
CCGCTGATGT ACTGCGACGC CCGGCGCCCG GACAGCGCGC AGACGACCCT GGTCCATCTT
GTGCGCCACG CACTGGAACT GGCTCTCTCC GGCGACCTGC CGGACGAGCC ATGA
 
Protein sequence
MVSPVSKRAP TAVKVLVAGG FGVGKTTFVG SVSEIEPLTT EAALTSASLG VDDTSAVHGK 
TTTTVAMDFG RLTLSNNIIL YLFGTPGQDR FWFMWDELVR GAIGAVVLVD TRRMADSFPA
IDFFENRRVP FLVAVNRFDA NTYEYPLPMV RNAADLAPHR PLMYCDARRP DSAQTTLVHL
VRHALELALS GDLPDEP