| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0364 |
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| Symbol | ispF |
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| ID | 5668788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 433138 |
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| End bp | 433620 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641239296 |
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| Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| Protein accession | YP_001504736 |
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| Protein GI | 158312228 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0344758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00193195 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGACCGAAC CGTCGCTGCC CCGGGTGGGC ACAGGTGTCG ACGTCCATCC CTTCGAGCAG
GGGCGGGAGT GCTGGGTCGC CTGCCTGTTG TGGCCCGGGG AGACGGGGCT CGCCGGGCAT
TCCGACGGTG ACGTCGCCTC GCACGCCGCG TGCGACGCGC TGCTCACCGC GTCCGGCATC
GGCGATCTCG GTGCCGTGTT CGGCACCGGT CGCCCCGAGT GGTCCGGTGC GTCCGGCGCG
GCGCTGCTCG GCGAGACCGC GCGCCTGCTC GCCGAGGGCG GCTGGCTGAT CGGGAACGTC
GCCGTCCAGG TGGTGGGCAA CCGCCCGCGG ATGGCCGCGC GCCGGGTCGA GGCGCAGGAG
GCGATGTCGG CGGCGCTGGG CGCCCCGGTG AACCTCTCGG CGACGACGAC GGACGGGCTG
GGCCTCACCG GCCGCGGCGA GGGCCTGGCC GCCATCGCGA CGGCTCTGGT CACCCGCGTC
TGA
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| Protein sequence | MTEPSLPRVG TGVDVHPFEQ GRECWVACLL WPGETGLAGH SDGDVASHAA CDALLTASGI
GDLGAVFGTG RPEWSGASGA ALLGETARLL AEGGWLIGNV AVQVVGNRPR MAARRVEAQE
AMSAALGAPV NLSATTTDGL GLTGRGEGLA AIATALVTRV
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