| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0358 |
|---|
| Symbol | |
|---|
| ID | 5668782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 426847 |
|---|
| End bp | 427926 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641239290 |
|---|
| Product | DNA integrity scanning protein DisA |
|---|
| Protein accession | YP_001504730 |
|---|
| Protein GI | 158312222 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1623] Predicted nucleic-acid-binding protein (contains the HHH domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.121799 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0150452 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGAC CACCCGGGGA TGACATCTTC CGGGCGACAC TCGCCGCGGT CGCGCCCGGT
ACCCCGTTCC GTGACGGTCT CGAGCGCATC CTGCGTGGGC ACACCGGAGC GCTCATAGTG
CTCGGCCACG ACAAGGTCGT CGAGGGCCTG TGCACCGGCG GATTCGAGCT CGACGTGGAG
TTCTCGGCCA CCCGCCTGCG CGAGCTGGCG AAGATGGACG GCGCGATCGT GCTCTCCTCC
GACCTCGCGC GGATCGTACG GGCCGCCGTG CACCTCGTCC CGGATCCCAC GGTTCCGACC
GAGGAGTCCG GCACTCGGCA CCGCACCGCG GAGCGGGTCG CGAAGCAGAC CGGCTTCCCC
GTGATCTCGG TCAGCCAGTC GATGCACATC ATCGCCCTGT ACGTGGCGGG GCGGCGGTAC
GTGCTCGACG GCGCCGCGGC CATCCTCTCC CGCGCCAACC AGGCGCTGGC CACGCTCGAA
CGCTACAAGC TGCGCCTCGA CGAGGTCGCC GGCACCCTCT CGGCGCTGGA GATCGAGGAT
CTGGTCACCG TCCGTGACGC TATCTCGGTG AGCCAGCGGC TGGAGATGGT CCGGCGGATC
GCCGACGAGA TCGAGAGCTA CGTCGTCGAG CTCGGGACGG ACGGCCGGCT GCTGTCGCTG
CAGCTCGAGG AGCTGATGGC CGGCGTCGAG ACCGAGCGCG AGCTCACCGT GCGCGACTAC
CTGCCGGTCG GCTCGCGGGC GGGCAACGCC GCCCAGGTGC TCGCCGAGCT GTCCGCGATG
TCACCGACGG ACCTGCTCGA CCTGACCGTC ATCGCCCGGG TGATCGGCTT CTCCGGCGGG
GCGGACATCC TCGACCGCCA GATCAGCCCG CGTGGCTACC GGATGCTGGC CAAGGTCCCG
CGCCTGCCGC GGATGGTGGT GGACCGCCTC GTCGACCACT TCAGCACCCT GCAGAAGCTG
CTCGCCGCCG GGGTCGACGA CCTCCAGGCG GTTGACGGCG TCGGTGAGAC CCGCGCCCGC
GCGGTCCGTG AGGGGCTCTC CCGGCTCGCG GAGTCGAGCA TCCTCGAACG CTACGTCTGA
|
|---|
| Protein sequence | MAGPPGDDIF RATLAAVAPG TPFRDGLERI LRGHTGALIV LGHDKVVEGL CTGGFELDVE
FSATRLRELA KMDGAIVLSS DLARIVRAAV HLVPDPTVPT EESGTRHRTA ERVAKQTGFP
VISVSQSMHI IALYVAGRRY VLDGAAAILS RANQALATLE RYKLRLDEVA GTLSALEIED
LVTVRDAISV SQRLEMVRRI ADEIESYVVE LGTDGRLLSL QLEELMAGVE TERELTVRDY
LPVGSRAGNA AQVLAELSAM SPTDLLDLTV IARVIGFSGG ADILDRQISP RGYRMLAKVP
RLPRMVVDRL VDHFSTLQKL LAAGVDDLQA VDGVGETRAR AVREGLSRLA ESSILERYV
|
|---|
| |