| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0325 |
|---|
| Symbol | |
|---|
| ID | 5668749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 389115 |
|---|
| End bp | 389951 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641239256 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001504697 |
|---|
| Protein GI | 158312189 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.760343 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0266533 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGACC CCGCACCGTC CGGGGATCCG AGCAGCCAGG ACGCCCACTC CGCGAGCGCC
GACGGAGACG CCCCTCCGGC GAGCGCCGAC GGAGACACTC GTCCGGCGAG CGGCGGCGGA
GCTCCGGTTC CCCCATGGCT GACCGCGCTG ATGGCGGCGG TGGGCGACGG CATCCCCGTC
CAGACGCGAC ACGCTCGCCA GACGCGGCCG GGCGGGCGGG CGGCGGCCGT CCTGATCCTG
TTCGGGGAGG GTCCGGACGG GCCTGACGTG CTGCTCCTGC AGCGGGCCGC CGACATGCGC
GACCATGCCG GGCAACCGGC GTTCCCCGGC GGCGGCGCCG ACGAGACCGA CGCGTCGAGG
GCCGCGACGG CGCTGCGTGA GGCGGAGGAG GAGGTCGGGC TCGACCCGGC CGGCGTCGAG
GTCCTCGCCA CCGCCAGCCC CCTCTACCTG GCTGCCAGCC ACTTCCTGGT CACCCCCGTG
CTCGCCTGGT GGCGCACGCC CACCGCGGTG GACGCGGTCG ACCCGGCGGA GACGTCCTCG
GTGGCCCGGG TACCCGTCGC GGAGCTCGCC GACCCGGCGA ACCGGATCCT GCTGTGGCAT
CCGTCCGGCT TCGGCAGCCC GGCGTTCCGC GTCCGCGGTA TGACGGTCTG GGGTTTCACC
GCGGGCGTCC TCGACGCCCT GCTGCGGCTC GGCGGATGGG AACGCCCCTG GGACACCGAG
ACGAAAGTGG ACGTGCCCGA GATCACCGTG GCGATCTCCG CGGCCATGGC CCTCCCCCAC
GCGGTGGTGG AGCCGCGGGG ACCACTCGAC GAAGCGGGCG GTACCGTCGG AAGATGA
|
|---|
| Protein sequence | MSDPAPSGDP SSQDAHSASA DGDAPPASAD GDTRPASGGG APVPPWLTAL MAAVGDGIPV
QTRHARQTRP GGRAAAVLIL FGEGPDGPDV LLLQRAADMR DHAGQPAFPG GGADETDASR
AATALREAEE EVGLDPAGVE VLATASPLYL AASHFLVTPV LAWWRTPTAV DAVDPAETSS
VARVPVAELA DPANRILLWH PSGFGSPAFR VRGMTVWGFT AGVLDALLRL GGWERPWDTE
TKVDVPEITV AISAAMALPH AVVEPRGPLD EAGGTVGR
|
|---|
| |