| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0318 |
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| Symbol | |
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| ID | 5668742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 381370 |
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| End bp | 382914 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641239249 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001504690 |
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| Protein GI | 158312182 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0476276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.440624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGGCC GCCAGTCGCT CCCCTCCCCG GGGAACCGCC CGCACCTGCC CGGCGTTGCT
CGCGCCAGTT CCCCTCTCCC CGGAACGGGT GGAGCCGGCG GGACCGGTGG AATCGGTGGG
CTCAGCGCGA CCAGCGGGAT CGACCGAATC GGCCAGATCA GTCAGATCAG TCGATTCGGC
GCAATGGCCG GGATGGCGGA GATCGGTGGG ATCACCGGCG GCGGTCCCGG CCGAACAGGC
GAACGCGAGG CCGCCCCGAG AATCCCAGGC GCATCCGCGG GCGGCGAGCA ACGACTCGGG
CCACTCAGCG TCCTGCTGCG GGACCCGGAG GTCACCGACG TCCTGGTCAA CGGCCCCGAT
CAGGTCTGGA TCGAGCGGGC CGGCCGCCTG CGGCACACGG CCGTGCGCTT CCCCGACGAC
GCCGCCCTCC GCGGGCTCGC CGTGCGGCTC GCCGGCAGTG GCGGCCGGCG CCTGGACACG
GCGATGCCGT TCGTCGACGT CCGGCTGCCC GACGGGATCC GGCTGCACGC GGTTCTCTCC
CCGCCCGCGC TCGGCGGGAC GTGCCTCTCG CTGCGCAGGC CACGGGCCCG GCCGTTCACC
CTGGACGAGC TCGCCGCGCT GGGAACGATC GGGCCGTCCG AGGTGATCGT GCTGCGCGCC
GTCCTCGCCG CCAGGTTGAC GACCGTGATC AGCGGCGGGA CGGGCACCGG GAAGAGCACC
CTGCTCGCCG CGCTGCTCGA CGCCGTCCCC GCGGGCGAAC GGATCGTGCT GGTCGAGGAC
ACCGCCGAGC TCGTCCTCGC CCGGTTCAAC CTGGTGCGGA TGGAGGCCCG CCCGCCCAAC
ATCGAGGGCG CGGGCGAGAT CACCCAACGC GAGCTCGTCC GGCAGGCACT CCGGATGCGC
CCGGACCGGC TGGTCGTCGG CGAGGTGCGG GGGCCGGAAG TGCTCGACCT CCTGATGGCG
ATGAATACGG GTCACGAAGG GGGGCTCGGT ACGGTTCATG CCAACACAGC CGAGACGGTG
CCCGCCCGGT TCGAGGCTCT CGGGGCACTC GCCGGCCTGC CGCGCGCCGC GCTGCACAGC
CATCTGGCCG CGGCCGTCCA CGTCGCCGTC CACCTCGGTC GCGACGGCGA CGGCGCCCGC
CGCGTCACCG GCATCGGTGT CGTGCGCCGC GACACGGACG GGATCGTGCG GATCGTGCCC
GCACTTGCCG GCGGAACCGG CCCGGTCCAC CGCGACACGC ACGGCAACGA CCGAGCACGT
GGCGACCAGC GGGCCCACGA CGACCACCGG TCCCACGACG ACCACCGGTC CCGCGGCGGC
CAGCGGACGT CCGGCGATCA GCGGCCACCC GGTGGCCGGG GAGTCCACGG CGGGCGTCCG
TTCGCCGGCG TCGAGCGCGA GGGGCTTCCC ATCCTGCGGG CGCTCCTGCG CGACCGCGGG
TTCTCGCTGT GGCCCTTCGA TCAGGCCACC CCGGTCCGGC GCGGCCCACG GCCGGCCCCG
GTCACCGCAC CGCCGCCTCC CGCGAGCGCG CCGGAGGCAC GATGA
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| Protein sequence | MNGRQSLPSP GNRPHLPGVA RASSPLPGTG GAGGTGGIGG LSATSGIDRI GQISQISRFG
AMAGMAEIGG ITGGGPGRTG EREAAPRIPG ASAGGEQRLG PLSVLLRDPE VTDVLVNGPD
QVWIERAGRL RHTAVRFPDD AALRGLAVRL AGSGGRRLDT AMPFVDVRLP DGIRLHAVLS
PPALGGTCLS LRRPRARPFT LDELAALGTI GPSEVIVLRA VLAARLTTVI SGGTGTGKST
LLAALLDAVP AGERIVLVED TAELVLARFN LVRMEARPPN IEGAGEITQR ELVRQALRMR
PDRLVVGEVR GPEVLDLLMA MNTGHEGGLG TVHANTAETV PARFEALGAL AGLPRAALHS
HLAAAVHVAV HLGRDGDGAR RVTGIGVVRR DTDGIVRIVP ALAGGTGPVH RDTHGNDRAR
GDQRAHDDHR SHDDHRSRGG QRTSGDQRPP GGRGVHGGRP FAGVEREGLP ILRALLRDRG
FSLWPFDQAT PVRRGPRPAP VTAPPPPASA PEAR
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