Gene Franean1_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0311 
Symbol 
ID5668735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp373694 
End bp374212 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content75% 
IMG OID641239242 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_001504683 
Protein GI158312175 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.13322 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCG TCGAGTTGCA CTTCGCCGCC TTGCCCGGCC ATGTCCGTAC CGCCCGGATG 
ATCGCGACCG CGGTCAGCAG GCGCGCGGGC GTGCCAGCCG GCGCCGTCGA CGAGATCAAG
TTGGCGGTTG GTGAGGCGTG CGCCCGAGCC GTCCGGGTCA ACCGCCGTAG CAATCCCGAG
GCGCTGGTGC ACGTGGCGCT GACCGACGCG CCGGAGACGT TCACCGTCAT CGTGTCGGAC
AGCGGCGCCC CGGGAGACGA GGTCGCCCCC GGGCCGGACG GCGGCCTCAT CAGCGCGCCT
GCCCTGCTGG ACCTCGGTGG CGCGGACCTC GGTGGCGCGG CGGCCCTCGG CTCCGCCGCG
CTCACCGCGC CGGGCCTTGA TGGCGACCCT GACGCCGACC AGCCCTTCCC GCCCGGCCTG
GGCCTGGCCC TCATCGAGGG CCTGGTCGAC GAGGTCGCCG TCCGGCGCGG CACCGGACGG
CACGGGCACC GTCGTCGAGA TGACCTGGCA CACCGGTGA
 
Protein sequence
MPTVELHFAA LPGHVRTARM IATAVSRRAG VPAGAVDEIK LAVGEACARA VRVNRRSNPE 
ALVHVALTDA PETFTVIVSD SGAPGDEVAP GPDGGLISAP ALLDLGGADL GGAAALGSAA
LTAPGLDGDP DADQPFPPGL GLALIEGLVD EVAVRRGTGR HGHRRRDDLA HR