| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0309 |
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| Symbol | |
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| ID | 5668733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 366844 |
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| End bp | 369915 |
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| Gene Length | 3072 bp |
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| Protein Length | 1023 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641239240 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001504681 |
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| Protein GI | 158312173 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.130268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.23063 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCACCGC GCACGAATTC GACGAGCCGG ACGACCGCGG GGTCGCCCAC GCCGGTCGCC
GAGCCCACCA AGCCCGCGGC AGCGAGCGCC ACGGCGGCCA GCGCCACGGC AGCCAAGGCC
GAAGCGGCCG AGACTGCCGA GGCCGGCGCC ACCGCAGGGC GCGCTTCGGG CGCCCGCGCC
ACGGGCGGGC GCCGCCCGGC GCGGGCCACC ACGAACGGTA ACGGGACCCG TCTGGTGATC
GTGGAGTCGC CGGCCAAGGC GAAGACGATC GCGGGCTACC TGGGCCCGGG GTGGCAGGTG
GAGTCGAGCA TCGGCCACAT CCGCGACCTG CCGCGCAGCG CCGCCGACGT GCCGACCGCG
CACAAGGGCA AGCCGTGGGC CCGGCTCGGG GTCGACGTCG ACAACGGCTT CGAGCCCCTC
TACGTCGTCA GCCCGGATAA GAAGGTCCAG GTCAGCAAGC TCAAGTCGCT CGTCAAGGAC
GCCAGCGAGC TCTACCTGGC GACAGACGAG GACCGCGAGG GCGAGGCGAT CGCCTGGCAC
CTCCTGCAGA CTCTGAAGCC GACCGTCCCG GTCAAGCGGA TGGTCTTCCA CGAGATCACC
CCGCAGGCCA TCCAGCGTGC GGTCGACAGC CCGCGGGAGA TCAACGAGAA CCTGGTCAAC
GCCCAGGAGA CCCGGCGGAT CCTGGACCGG CTCTACGGCT ACGAGGTCTC CCCCGTGCTG
TGGAAGAAGG TCATGCCCAA GCTCTCGGCA GGGCGGGTCC AGAGCGTGGC GACCCGCATC
CTCGTCGAGC GGGAGCGGGC GCGGATGCGG TTCCGCACCG CGGAGTACTG GAACATCGAG
GGCGTCTTCC AGCAGAACGT CGCGCACGAC GGCGCCGCCC TCGACACGAC CCCGCTCCCG
GCGACCCTCG TCGCGCTGGA CGGGCGGCGC CTGGCCAGCG GCCGCGACTT CGCCCCGACC
GGCGAGCTGA CGTCCGACGG GGTCGCACTG CTCGACGAGG CCGGTGCCCG CGCGCTGGCC
GGGCGGCTCA CCGGTGCCGC GTTCGCGGTG CGGTCGGTCG AGACCAAGCC GTACCGGCGC
TCGCCCTACC CGCCGTTCAT GACCTCCACG CTCCAGCAGG AGGCCGGCCG CAAACTGCGG
TTCTCCAGCC AGCGCACGAT GCAGGTCGCG CAGCGCCTCT ACGAGAACGG CTACATCACC
TACATGCGGA CGGACTCGAC GAACCTGTCC GAGACCGCCC TGGTCGCCGC CCGGGACCAG
GCCCGCACCC TCTACGGCGC CGAGTACGTC CCGGACCGGC CCCGCGTCTA CGCCAAGAAG
GTCAAGAACG CCCAGGAGGC CCACGAGGCG ATCCGGCCCG CCGGGGATCA CTTCCGGACC
CCGGGTGAGG TGCGCTCGGA GCTCGACGGT GACTCGTTCC GCCTGTACGA GCTGATCTGG
CAGCGCACGG TGGCCAGCCA GATGGCCGAC GCGCGCGGCA CCAGCGCCAC CATCCGCCTG
GGCGCGACCT CCAGCTCCGG GGAGGACGCA GAGTTCTCCG CCTCCGGCAA GGTGATCACC
TTCCCCGGGT TCCTGCGCGC GTACGTCGAG GGCGCCGACG ACCCGGACGC CGAGCTCGAG
GACCGCGAGC GGCGGCTGCC CGACGTCCGG CGGGGGGACC CGCTGGCCAC TCGCACGCTC
ACCCCGCGTG GCCACACGAC CAGCCCGCCG CCGCGGTTCA CCGAGGCCAG CCTGGTCAAG
ACGCTGGAGG AGCTGGGGAT CGGCCGGCCG TCCACCTACG CGTCGATCAT CGGCACGATC
CAGGACCGCG GCTACGTGTG GAAGAAGGGG TCCGCGCTGG TCCCGAGCTT CGTCGCGTTC
GCGGTGGTCG GGCTGTTGGA GGACCACTTC ACCCGGCTCG TGGACTACCA GTTCACGGCC
TCGATGGAGG ACGACCTCGA CGCGATCGCC GCTGGTACGG CCGCGTCCAC GGACTGGCTC
ACCGGGTTCT ACTTCGGTCT GCCCGACACG ACCGACACCG GCGGTTCCGG CGCGGTCGAG
GGCCTCAAGC ACCTGGTCGG CGAGCGGCTC GGGGAGATCG ACGCCCGCGA GGTCAACTCC
ATCCCGCTGG GCAAGGCGGA CGACGGCGAG CCTGTCGTCG TGCGGGTCGG CCGTTACGGG
CCCTATGTCC AGCACGCCGA CGGGCGTGCC AGCGTCCCGG ACGAGGTCGC TCCCGACGAG
CTGACCGTGG AGCGCGCGCT CGAACTGCTG GCCGCGCCCA GCGGCGACCG TCTGCTCGGC
ACGGACCCGA AGACGGGTGC GTCGATCACC GCGAAGGCCG GCCGCTACGG CCCGTACGTG
ACGACGGACA GCGAGCCGCC GCAGACCGCG AGCCTGCTGC GCACCATGTC GTTGGAAACC
GTGACCCTCG AGGACGCGCT GCGGCTGCTG ACGCTCCCCC GCGTCCTCGG CACCGACGCG
GAAGGCGCGG AGGTCACCGC CCAGAACGGG CGGTACGGCC CCTATGTGAA GAGGGGCGCC
GACAGCCGTT CGCTGGAGTC CGAGGACCAG TTGTTCACGG TGACGCTGGA CGAGGCGCTC
GCGCTGCTCG CGCAGCCGAA GGCCCGCGGT CGGCGCCAAG CGGCGCAGAC GCCGCCGCTG
CGTGAGCTCG GGCCCGACCC CGCCACCGAG CGCCCGATGG TCCTGCGCGA GGGCCGGTTC
GGCCCGTACG TGACCGACGG CGAGACCAAC GCCAGCCTGC GCAAGGGCGA CGCGGTCGAG
ACCATCACGG TCGAGCGTGC CGCCGAGCTC CTCGCGGACC GCCGAGCCCG CGGCACGACC
ACGCCGCGCC GGACCACGAA GACCACGGCC AAGGCGCCCG CGAAGGCCAC AGCCAAGCCC
CGGACGGCCG CGAAGACCAC CACGAAGGCC AAGACCGCGG GCAAGACGTC GGGCGGCACG
GCGAAGTCCG GCTCCCGCGC GTCGAAGTCC GCCGCCAGCG ACGCCGGGGC GACCGGCACC
GCCGCGGGCG ACGCGTCCGG CACCGACAGC GCCACCGGAG CAACGTCCGG TGGCTCGCAG
CGGTCGAGCT GA
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| Protein sequence | MPPRTNSTSR TTAGSPTPVA EPTKPAAASA TAASATAAKA EAAETAEAGA TAGRASGARA
TGGRRPARAT TNGNGTRLVI VESPAKAKTI AGYLGPGWQV ESSIGHIRDL PRSAADVPTA
HKGKPWARLG VDVDNGFEPL YVVSPDKKVQ VSKLKSLVKD ASELYLATDE DREGEAIAWH
LLQTLKPTVP VKRMVFHEIT PQAIQRAVDS PREINENLVN AQETRRILDR LYGYEVSPVL
WKKVMPKLSA GRVQSVATRI LVERERARMR FRTAEYWNIE GVFQQNVAHD GAALDTTPLP
ATLVALDGRR LASGRDFAPT GELTSDGVAL LDEAGARALA GRLTGAAFAV RSVETKPYRR
SPYPPFMTST LQQEAGRKLR FSSQRTMQVA QRLYENGYIT YMRTDSTNLS ETALVAARDQ
ARTLYGAEYV PDRPRVYAKK VKNAQEAHEA IRPAGDHFRT PGEVRSELDG DSFRLYELIW
QRTVASQMAD ARGTSATIRL GATSSSGEDA EFSASGKVIT FPGFLRAYVE GADDPDAELE
DRERRLPDVR RGDPLATRTL TPRGHTTSPP PRFTEASLVK TLEELGIGRP STYASIIGTI
QDRGYVWKKG SALVPSFVAF AVVGLLEDHF TRLVDYQFTA SMEDDLDAIA AGTAASTDWL
TGFYFGLPDT TDTGGSGAVE GLKHLVGERL GEIDAREVNS IPLGKADDGE PVVVRVGRYG
PYVQHADGRA SVPDEVAPDE LTVERALELL AAPSGDRLLG TDPKTGASIT AKAGRYGPYV
TTDSEPPQTA SLLRTMSLET VTLEDALRLL TLPRVLGTDA EGAEVTAQNG RYGPYVKRGA
DSRSLESEDQ LFTVTLDEAL ALLAQPKARG RRQAAQTPPL RELGPDPATE RPMVLREGRF
GPYVTDGETN ASLRKGDAVE TITVERAAEL LADRRARGTT TPRRTTKTTA KAPAKATAKP
RTAAKTTTKA KTAGKTSGGT AKSGSRASKS AASDAGATGT AAGDASGTDS ATGATSGGSQ
RSS
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