| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0308 |
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| Symbol | |
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| ID | 5668732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 364424 |
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| End bp | 366553 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641239239 |
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| Product | dTMP kinase |
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| Protein accession | YP_001504680 |
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| Protein GI | 158312172 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0125] Thymidylate kinase |
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| TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.233817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCTCGC CACCGCGTGC GCGTACCACC GGCGGCTCGG ACGGCGACCT GCGGGCGGTT
CTGCGGATTC CCGAGTTCCG CCGGATGTGG ATCCAGCTCA GCCTTTCCAG CCTGGGCGAC
TGGATGGGCC TGCTGGCGAC CACCGCCCTG GTCACCCAGC TGACCGAGAG CTTCTCCGGA
CAGGCGTTCG CGATCAGCTC CCTGCTGATC GTCCGTCTGC TGCCCGCGCT CGTGCTGGGC
CCGCTCGCCG GAGCGATCGC CGACCGCCTC GACCGCCGGA TGACCATGGT CATCACCGAC
GTGATGCGGT TCGGGCTGTT CCTGTCCATC CCGATCGTGG GAACCCTCGG ATGGCTACTG
ATCGCGTCCT TCCTCGTCGA GTGCGTGAGC CTGGTGTGGG CACCGGCCAA GGAGGCCTCG
ATCCCGCACC TGGTCCCGCG TAACCGGCTC GCGGCGGCCA ACACCCTCAG CCTGATAACG
ACCTACGGCA CGGCGCCGCT GGCCGCGGCG ATCTTCACGC TGCTCGCCAC CGTGTCCCGG
GCCCTGGGCC CGTCCATTCA CTTCTTCCGC GACTCCTCTC TGGACATCGC GCTGTACTTC
AACGCGGCCA CGTTCCTCGG GTCGGCGATC GTCATCTGGG GCCTGCGGTC GATCGGCCGC
GCGGAACGGC CCGAGCACAG CACGGAGCCG GGCTTCTTCG CCTCGATCAC CGAGGGCTGG
AAGTTCGTCG GCCAGGACCG CCTCGTCCGC GGGCTGGTCG TCGGAATCCT CGGCGGCTTC
GCCGGCGCCG GCTGTGTGGT GGCGCTCGGC AAGCTCTACG TCGAGATCCT CGGCGGTGGC
GACTCGGCCT ACGGCGTGCT GTTCGGCGCG GTGTTCATCG GCCTCGCCGC CGGAATGGGC
GCCGGCCCGA AGCTGCTCGG GGATTACAGC CGCACCCGCC TTTTCGGCGT CTGTGTCACC
GCCGCGGGAA TCACGCTGGT GGTCGTCGCG ATCATCCCGA ATCTGGTGAT CGCCTGCATT
CTGGTCGTGT TCGTCGGCGC CCTCGCCGGC GTCGCCTGGG TGACCGGGTA CACACTGCTG
CAGGCCGAGG TCGCCGATGA GCTGCGCGGG CGCACCTTCG CGCTGGTCCA GTCGCTGGTA
CGGGTCGACC TGCTGGTCGT ACTCGCGGCC GCGCCGGCCC TCGTCGGTCT GATCGGTTCG
CACCAGGTCC ACCTCTGGGG TGACATCAAC GTCCGGGCCG ACGGTGTCAC CGTCGTCCTG
CTCGCCGGCG GGCTGCTCGC CGTCGCGGTC GGCCTGTTCT CCTACCGCCA GATGGACGAC
CACACCGGGG AAGCCGTCCT GCCCGAGCTG TGGAACGCGC TGCGCGGGCG GCGGCCGGGC
ACTGCCCGCC GCCGTCATGG CGGATTGTTC ATCACCGTCG AGGGTGCCGC GGGCGCCGGC
AAGACGACCC AGCTGGAGCT GTTGCGAAGC TGGCTGTCCT CGAGCGGGCG CGAGGTCGTT
CCGGCGTACG AGACCGACGG GACGTCCCTC GGCGCGGGCC TGCGGGACCT GCTGGACGAC
CCCGCGAACC GGCTGCACGC CCGGACCGAG CTGCTGCTGG ACGCGGCCGA CCGCGCCGAG
CACGTGGCCC GGGTCATCGA ACCGGCGCTG GCACGGGGCG CGATCGTGCT CACCGACCGT
TACGTGGACT CCGCGATCGC GTGCCAGGCG CTCGGCCAGC GGATCGACAG CGACGAGCTG
ACGGTGCTGA CCCAGTGGGC CAGCCACTCG TTGCTGCCCG ACGTGACGAT CCTGCTGGAC
CTGCCTGCGG AGCAGGCGCT GGCCCGAGGT GGGAGTGATC CTCACCTCGG GCGGGAGAGC
GAGGGCGACG GCAGCGGACA CGATGGCGGT GCCGGGCGCG GCGGCGGTGC CGGGCACGGC
GCGGGGCCGG ATCGCTCCGG CACCGACCCG GTCGCGGCCG TGGCCTACCA CCGACGGGTC
CGCGAGCACT TCCGCAGGCT CGCGGACGAG GATCCGGACC GGCACGTCAT CCTGGACGCG
ACGCTCTCCC CGCAGGAGCT GCACCGGCAG ATCCGTGCGG TGATCGCCGG ACGCCTGCGC
CCGGCGATCA CCGGTGACGA CCCGCGATGA
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| Protein sequence | MPSPPRARTT GGSDGDLRAV LRIPEFRRMW IQLSLSSLGD WMGLLATTAL VTQLTESFSG
QAFAISSLLI VRLLPALVLG PLAGAIADRL DRRMTMVITD VMRFGLFLSI PIVGTLGWLL
IASFLVECVS LVWAPAKEAS IPHLVPRNRL AAANTLSLIT TYGTAPLAAA IFTLLATVSR
ALGPSIHFFR DSSLDIALYF NAATFLGSAI VIWGLRSIGR AERPEHSTEP GFFASITEGW
KFVGQDRLVR GLVVGILGGF AGAGCVVALG KLYVEILGGG DSAYGVLFGA VFIGLAAGMG
AGPKLLGDYS RTRLFGVCVT AAGITLVVVA IIPNLVIACI LVVFVGALAG VAWVTGYTLL
QAEVADELRG RTFALVQSLV RVDLLVVLAA APALVGLIGS HQVHLWGDIN VRADGVTVVL
LAGGLLAVAV GLFSYRQMDD HTGEAVLPEL WNALRGRRPG TARRRHGGLF ITVEGAAGAG
KTTQLELLRS WLSSSGREVV PAYETDGTSL GAGLRDLLDD PANRLHARTE LLLDAADRAE
HVARVIEPAL ARGAIVLTDR YVDSAIACQA LGQRIDSDEL TVLTQWASHS LLPDVTILLD
LPAEQALARG GSDPHLGRES EGDGSGHDGG AGRGGGAGHG AGPDRSGTDP VAAVAYHRRV
REHFRRLADE DPDRHVILDA TLSPQELHRQ IRAVIAGRLR PAITGDDPR
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