| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0289 |
|---|
| Symbol | |
|---|
| ID | 5668713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 339741 |
|---|
| End bp | 341312 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641239219 |
|---|
| Product | peptidase U62 modulator of DNA gyrase |
|---|
| Protein accession | YP_001504661 |
|---|
| Protein GI | 158312153 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACCT CCGTTCCCCG GGATCCGGCC GAGCCGGCCC TGCCGCCGCA CGAGATCGAC
GAGGAGTTCC GCGCGCTGCC CACCGCGGCC CTCACCGACG CCGCGCTCCA GGCCGCCCGA
GACCTGGGTG CCGCCCACGC CGACATCCGG ATCGAACGTC TCAAGGAGTC GTCGCTGTCG
TTCCGCGACG CCGGCCTGGA GAGCCGTTCG GACGGTGTCA CCGCGGGCTT CGCCGTCCGC
GTCGTCCACG ACGGGACCTG GGGCTTCGCC GCCGGTGTGG ATCTGACCGT GGATGAGGCC
GTGCGGGTCG CCCGGGAGGC CGTCGCCATG GCGAAGGTGG CGCGGCCGCT GAACTCCGAG
CCGGTCGAGC TGGCCGACGA GCCCGTTCAC GCCGGCGCGA CCTGGGTCTC CAGCTACGCC
ACGGACCCGT TCTCGGTCGA TCCGCGCGAC CAGGTCGAGC GGATCGGCGG GCTGTGCCGG
TCGCTGTACT CCGCCGAGGA CGTCGATCAC GTCGACGGAC GGTTCGCCGC CGTCATGGAG
AACAAGTTCT ACGCCGACAC CGCCGGGACG GACACCACCC AGCAGCGGGT CCGCGTGCTC
TGCCAGCTCG AGGCGACCCG GGTCGACCCG GCGGGTGGCT TCGAGTCCAT GCGCACCATC
GCGCCTCCGG CCGGCCGCGG CTGGGAGTGG ATGGTCGGCG GCTCGGCGGC CGGCTGCTGG
GACTGGGAGT CCGAGACCGA GCTCATCCCC TCGCTGCTGG CCGAGAAGGC GAAGGCGTCG
TCGGTGGAAC CGGGGCGCTA CGACCTGGTT ATCGACCCGT CGAACCTGTG GCTGACGATC
CACGAGTCGG TCGGGCACGC CACCGAGCTC GACCGGGCTC TCGGCTACGA GGCCGCCTAC
GCCGGGACGT CCTTCGCCAC GCTCGACAAG CTCGGGTCGC TGCGCTACGG ATCACCGGCG
ATGACCGTGA CCGGCGACCG GACGGCACCG CACGGCCTGG CCACCATCGG CTACGACGAC
GAGGGCGTGC AGACCCGCCG CTGGGACATC GTCCGCGACG GTGTCCTGGT CGGCTACCAG
CTCGACCGGC GGATGGCGGC GCAGAACGCG TCCACGCTCG GCGTGGACCG CTCCAACGGC
TGCGCCTTCG CGGACTCCCC CGGGCATGTA CCGATCCAGC GGATGGCGAA CGTCTCACTG
CTCCCCGCGC CCGGCGGGCC GTCCACGGAG GACCTGATCG GCCGGGTCGA CCGGGGGATC
TACGTGGTCG GCGACCGGAG CTGGTCGATC GACATGCAGC GCTACAACTT CCAGTTCACC
GGGCAGCGGT TCTACGAGAT CCGCAAGGGC CGGATCGTCG GCCAGCTGCG CGACGTCGCC
TACCAGGCGA CCACCACGGA CTTCTGGGGC TCGCTGGACG CCGTCGGCGG CCCCGAGACC
TACGTGCTGG GCGGGGCGTT CAACTGCGGC AAGGGCCAGC CCGGCCAGGT CGCGGCGGTC
AGCCACGGCT GCCCGTCGGC GCTGTTCCGC GACGTCAACA TCCTGAACAC GCGCCGCGAG
GGCGGCCGAT GA
|
|---|
| Protein sequence | MATSVPRDPA EPALPPHEID EEFRALPTAA LTDAALQAAR DLGAAHADIR IERLKESSLS
FRDAGLESRS DGVTAGFAVR VVHDGTWGFA AGVDLTVDEA VRVAREAVAM AKVARPLNSE
PVELADEPVH AGATWVSSYA TDPFSVDPRD QVERIGGLCR SLYSAEDVDH VDGRFAAVME
NKFYADTAGT DTTQQRVRVL CQLEATRVDP AGGFESMRTI APPAGRGWEW MVGGSAAGCW
DWESETELIP SLLAEKAKAS SVEPGRYDLV IDPSNLWLTI HESVGHATEL DRALGYEAAY
AGTSFATLDK LGSLRYGSPA MTVTGDRTAP HGLATIGYDD EGVQTRRWDI VRDGVLVGYQ
LDRRMAAQNA STLGVDRSNG CAFADSPGHV PIQRMANVSL LPAPGGPSTE DLIGRVDRGI
YVVGDRSWSI DMQRYNFQFT GQRFYEIRKG RIVGQLRDVA YQATTTDFWG SLDAVGGPET
YVLGGAFNCG KGQPGQVAAV SHGCPSALFR DVNILNTRRE GGR
|
|---|
| |