| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0285 |
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| Symbol | |
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| ID | 5668709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 334755 |
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| End bp | 335654 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641239215 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001504657 |
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| Protein GI | 158312149 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACCG ATGCGGCCGC CAGCGGCGCC CTGCCCCAGC GCCAGGGCTC CGACGACGGG
CTCACCGGCT CCGATGATCG GCTCCTGGGC CGGCACACGG CCCGGGACGA GGCGGGGTGG
TCCGACCTGG AGGACCCCGA GCCTGTTCCG GGCGAGGCGG CTGGGCCGGA GTCTGCCGGC
GGCACGGGCA CGCCCCTGAA CGCGCCGGTC GAGTTCCGGG AGTTCTTCGA GCGCCACCAC
CGCGAGCTGT CGCGTTTCGC CTATCTGCTC ACCGGCGACC ACGACGCGGC TGACGACCTC
ACCGCCGAGG CGCTCACGGC CGCCTGGTCC AAGTGGGAGC GGGTCAGCAG CGCGGACAGC
CCACTCGCCT ACGTGCGGCG CATCGTGGCG AATCTGGCCA CCAGCCGGCT GCGGCGGGTG
ATCCGGGAAC GCCGGGGGAT GACCGTCCTC GGCATGCTGG CCGAACGTAC CGAGCACGCT
GCGGACGACG CCGACGTTCC CGCCGCCGTG GACCTGCGCG CCGCGCTGAT GACCCTTCCA
GCCAGGAAGC GGGCGTGTGT CGTGCTGCGG TACGCCTTCG ACCTGTCCGA GGCGGACACT
GCCCGGACGC TGGGAATCTC CGTCGGAACG GTGAAGAGCC AGACATCCAA GGCGGTGGCC
GAGCTCGAAC GGGTACTCGG CACCAGGCCC GAACTGACCC ACTCCGACCC GCCGGACGGC
ACCCCGGCCC GAAAACCGGA CGCGCGCCCC CTGGCCCCGC AGGCACCGCG CCGAGCCGGT
GCCACGCGCG GCCGCCGGCG TGCGGCCGGC GGAACGGATC CGGCGAGCGT CGCCCGGTCG
GCGCTGAACC GGCTGCGCGA CAGCGAGGCA CCCGGACGGC TCCGCGGCAG CGAGGGCTGA
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| Protein sequence | MSTDAAASGA LPQRQGSDDG LTGSDDRLLG RHTARDEAGW SDLEDPEPVP GEAAGPESAG
GTGTPLNAPV EFREFFERHH RELSRFAYLL TGDHDAADDL TAEALTAAWS KWERVSSADS
PLAYVRRIVA NLATSRLRRV IRERRGMTVL GMLAERTEHA ADDADVPAAV DLRAALMTLP
ARKRACVVLR YAFDLSEADT ARTLGISVGT VKSQTSKAVA ELERVLGTRP ELTHSDPPDG
TPARKPDARP LAPQAPRRAG ATRGRRRAAG GTDPASVARS ALNRLRDSEA PGRLRGSEG
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