Gene Franean1_0249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0249 
Symbol 
ID5668674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp303104 
End bp304078 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content73% 
IMG OID641239179 
Producthelix-turn-helix type 11 domain-containing protein 
Protein accessionYP_001504622 
Protein GI158312114 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAGA CCTCGGCCCG CCTGCTCCGG CTGCTCTCGC TGCTGCAGAC CCACCGAGAC 
TGGTCCGGGG CGGACCTGGC CGACCGGCTC GGGGTCACCG CCCGCACCGT CCGGCGGGAC
GTCGACAAGC TGCGCAGCCT CGGCTACCCG GTGCACGCCG CACCTGGCAC GGCTGGCGGC
TACCGCCTCG GCGCGGGCGC CCAGCTGCCG CCCCTGCTGC TCGACGACGA CGAGGCCGTC
GCCGTCGCCG TGAGCCTGCG CACCGCCGCC GGCGGCTCGG TCGAGGGCAT CGCCGAGTCC
GCCATCCGTG CGCTGACGAA GCTCGAGCAG GTCCTGCCGA CCCGGCTTCG GCACCGGGTG
TTGGCGCTGC ACTCGGTCAC CGTGTCCCTG CGTGGCACGA ATCCCGCGGC CGTCGACCCG
GACGTCCTGA TGGCCGTGGC GACCGCCTGC CGCGAGAACC AGCAACTGCG GTTCGACTAC
CGCGACCACA ACGGGATACC GACCGCGCGG ATCACCGAAC CGCACACCCT CGTCCACACC
GGGTGGCGCT GGTACCTCAT CGCCTGGGAC GTCGGCCGTG GCGCCTGGCG CAACTTCCGC
CTCGACCGCA TCGCGCCGAA GACCCCGACC GGCCCGAGGT TCACCCCCCG GGACCCACCC
GCGGACGACA TCCAGGCGTA CACGTCCTGG TCGGTCTCCA CCGCCGGGTA CCGGTACCAG
GCCCGCGTGC GCTACCACGC ACCCGCCGGG GTGATCGCCG CCTCGCTCAG CCCGACCTCC
GCCGTGATCG AGGCGCTCGA CGACGAGAGC TGCCTGGTCC GGACGGGTTC CAACTCGCTG
GACGCACTCA CGATCTACCT CAGCCTCGTC GACGCGGACT TCGACGTGCT CGAACCGCCC
GAGCTCGTCG ACCGCGTCCG CGAGCTTGCC GGCCGGCTCG CGCGAGCGGC ACCGCCGCCA
CCACCCACCG GCTGA
 
Protein sequence
MLETSARLLR LLSLLQTHRD WSGADLADRL GVTARTVRRD VDKLRSLGYP VHAAPGTAGG 
YRLGAGAQLP PLLLDDDEAV AVAVSLRTAA GGSVEGIAES AIRALTKLEQ VLPTRLRHRV
LALHSVTVSL RGTNPAAVDP DVLMAVATAC RENQQLRFDY RDHNGIPTAR ITEPHTLVHT
GWRWYLIAWD VGRGAWRNFR LDRIAPKTPT GPRFTPRDPP ADDIQAYTSW SVSTAGYRYQ
ARVRYHAPAG VIAASLSPTS AVIEALDDES CLVRTGSNSL DALTIYLSLV DADFDVLEPP
ELVDRVRELA GRLARAAPPP PPTG