Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0249 |
Symbol | |
ID | 5668674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 303104 |
End bp | 304078 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641239179 |
Product | helix-turn-helix type 11 domain-containing protein |
Protein accession | YP_001504622 |
Protein GI | 158312114 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGAGA CCTCGGCCCG CCTGCTCCGG CTGCTCTCGC TGCTGCAGAC CCACCGAGAC TGGTCCGGGG CGGACCTGGC CGACCGGCTC GGGGTCACCG CCCGCACCGT CCGGCGGGAC GTCGACAAGC TGCGCAGCCT CGGCTACCCG GTGCACGCCG CACCTGGCAC GGCTGGCGGC TACCGCCTCG GCGCGGGCGC CCAGCTGCCG CCCCTGCTGC TCGACGACGA CGAGGCCGTC GCCGTCGCCG TGAGCCTGCG CACCGCCGCC GGCGGCTCGG TCGAGGGCAT CGCCGAGTCC GCCATCCGTG CGCTGACGAA GCTCGAGCAG GTCCTGCCGA CCCGGCTTCG GCACCGGGTG TTGGCGCTGC ACTCGGTCAC CGTGTCCCTG CGTGGCACGA ATCCCGCGGC CGTCGACCCG GACGTCCTGA TGGCCGTGGC GACCGCCTGC CGCGAGAACC AGCAACTGCG GTTCGACTAC CGCGACCACA ACGGGATACC GACCGCGCGG ATCACCGAAC CGCACACCCT CGTCCACACC GGGTGGCGCT GGTACCTCAT CGCCTGGGAC GTCGGCCGTG GCGCCTGGCG CAACTTCCGC CTCGACCGCA TCGCGCCGAA GACCCCGACC GGCCCGAGGT TCACCCCCCG GGACCCACCC GCGGACGACA TCCAGGCGTA CACGTCCTGG TCGGTCTCCA CCGCCGGGTA CCGGTACCAG GCCCGCGTGC GCTACCACGC ACCCGCCGGG GTGATCGCCG CCTCGCTCAG CCCGACCTCC GCCGTGATCG AGGCGCTCGA CGACGAGAGC TGCCTGGTCC GGACGGGTTC CAACTCGCTG GACGCACTCA CGATCTACCT CAGCCTCGTC GACGCGGACT TCGACGTGCT CGAACCGCCC GAGCTCGTCG ACCGCGTCCG CGAGCTTGCC GGCCGGCTCG CGCGAGCGGC ACCGCCGCCA CCACCCACCG GCTGA
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Protein sequence | MLETSARLLR LLSLLQTHRD WSGADLADRL GVTARTVRRD VDKLRSLGYP VHAAPGTAGG YRLGAGAQLP PLLLDDDEAV AVAVSLRTAA GGSVEGIAES AIRALTKLEQ VLPTRLRHRV LALHSVTVSL RGTNPAAVDP DVLMAVATAC RENQQLRFDY RDHNGIPTAR ITEPHTLVHT GWRWYLIAWD VGRGAWRNFR LDRIAPKTPT GPRFTPRDPP ADDIQAYTSW SVSTAGYRYQ ARVRYHAPAG VIAASLSPTS AVIEALDDES CLVRTGSNSL DALTIYLSLV DADFDVLEPP ELVDRVRELA GRLARAAPPP PPTG
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