| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0231 |
|---|
| Symbol | |
|---|
| ID | 5668656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 283089 |
|---|
| End bp | 284270 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641239160 |
|---|
| Product | chaperone DnaJ domain-containing protein |
|---|
| Protein accession | YP_001504604 |
|---|
| Protein GI | 158312096 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.208592 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.303974 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGTTC GCGACATGGT TGAAAAGGAC TACTACGCCG CTCTCGGTGT CCCCAAGGAC
GCGTCCGCGG CCGACATCAA GAAGGCGTAC CGCAAGCTCG CCCGGGAGCT GCACCCGGAC
AAGAACCCCG GGGATGTGAA GGCGGAGGCA CGCTTCAAGG AGGTGTCCGA GGCCTACGAC
GTCCTCTCCG ACGAGAACCG CCGGCGGGAG TACGACGAGG CCCGGGCGCT GTTCGCCTCC
GGCTCCTACC CGGGTGCGGG TGGGCGCGGC GGCGGCATGG GCGGGTTCGG GACGCCGGGC
GGCTACGGCC CAGGTGCCGG GAACCTGAAC CTCGACGACC TGCTCAACGG CAACGGCGGC
GGCGGGCTCG GCGGGATCTT CGACAACCTC TTCCAGCGGA CACCGACCGG GCGCGCCCCG
CGCCGCGGCA CGGACATCGC GGCGGAGGTG ACCATCTCGT TCGAGAAGTC GCTGACCGGC
CTCGAGGCGA CGGTGCGGCT GCCCGGGGCC GCCACCTGCG CCACCTGCGC CGGCATCGGG
GCCCGCCCCG GGACGTCCCC CCGGACGTGC CCGGTCTGCC GGGGCCTCGG CGTGATCTCC
CGGTCGCAGG GCGGGTTCGC GCTGTCCGAG CCGTGCCGCG ACTGCCTGGG CAAGGGCAGC
CTGATCGACC ACCCCTGCCC CGACTGCCAC GGCACCGGCC GCCGCGAGCG CGAGCAGCGC
ATCCGCATCC CGGCCGGGGT CAGCGACGGT CAGCGCCTGC GGGTACGCGG GCGCGGCTCG
CCCGGCGAGC GCGGCGGCGC GGCCGGTGAC CTCGAGGTCA CCGTGCACGT GCAGAGCCAT
CCCGTGTTCG GGCGGGAGGG CCACAACCTG ACGATCAACC TGCCGGTGAC GATCACCGAG
GCGGCCCTGG GCGCCTCGGT GAAGGTACCG ACGATCGACG GCACCCCGCT GACGGTCAAG
GTTCCGGCCG GCACCTCGAG CGGACGGCGG CTGCGTGCCC GCAACCGGGG CGTCCCGCGC
CCCGGCGGGG AGAACGGTGA CCTCATCGTG ACGCTCGAGG TGACCGTTCC CAAGCCGTCC
GAGCTCTCGC CGAAGGCGCG CACCGCGCTC CAGGAGTTCG CGCGGGCGCA TCCCGAGGAC
CCTCGTGAAT CCCTGATAGC CCAGATGGAG GGACGGGCAT GA
|
|---|
| Protein sequence | MSVRDMVEKD YYAALGVPKD ASAADIKKAY RKLARELHPD KNPGDVKAEA RFKEVSEAYD
VLSDENRRRE YDEARALFAS GSYPGAGGRG GGMGGFGTPG GYGPGAGNLN LDDLLNGNGG
GGLGGIFDNL FQRTPTGRAP RRGTDIAAEV TISFEKSLTG LEATVRLPGA ATCATCAGIG
ARPGTSPRTC PVCRGLGVIS RSQGGFALSE PCRDCLGKGS LIDHPCPDCH GTGRREREQR
IRIPAGVSDG QRLRVRGRGS PGERGGAAGD LEVTVHVQSH PVFGREGHNL TINLPVTITE
AALGASVKVP TIDGTPLTVK VPAGTSSGRR LRARNRGVPR PGGENGDLIV TLEVTVPKPS
ELSPKARTAL QEFARAHPED PRESLIAQME GRA
|
|---|
| |