Gene Franean1_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0227 
Symbol 
ID5668652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp277387 
End bp278307 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content74% 
IMG OID641239156 
Productindigoidine synthase A family protein 
Protein accessionYP_001504600 
Protein GI158312092 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2313] Uncharacterized enzyme involved in pigment biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.771523 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCAC CCGGTCCGGG CCTGGCCGTC TCCGCCGAGG TCTCGGCGGC GCTGGCTGCC 
GGCCGGCCGG TGGTCGCCCT GGAGTCGACG CTGATCGCCC ACGGCCTGCC GCGCCCGCGC
AACCGCGCGG TCGCCGTGGA ACTGGAGGAG ATGCTGCGCG AGCGCGGCGT CACCCCCGCG
ACAGTCGCAG TGATCGACGG AGTGCCCACC ATCGGCCTGG ACGACGCCAC GCTCAGCCGC
GTCGCCGACG ACCCGGCGGT GGCCAAGGCG TCCGTGCGCG ACCTGCCCGC CGCCGCCGCG
CTGAGGCGCA CCTGCGCAAC CACGGTCGCG TCCACGTCGA TGCTGGCCGC CCGTGCGGGC
ATCCGGGTGT TCGCGACGGG TGGGCTCGGC GGCGTACACC GCGGGGCGGG CGAGTCCTTC
GACGAGTCCG CCGACCTGCC GACACTGGGC GGCACCCCGA TCACCGTCGT CAGCGCCGGC
GTCAAGTCGA TCCTGGACGT CGGCGCGACC CTCGAGCGGA TGGAGACCCT CGGGATCACG
CTGCTGGGCT GGCGCACCTC GGAGTTCCCG GGTTTCTACC TCCCGGGCTC CGGCCACCGT
CTGGACTGGC GGGTGGACGA CGCCCGGCAG GTCGCTGGCA CCATGGCGGC CCGCGACCGC
CTCGGGCTGA CGTCCGCGAT CGTGGTCGCG AACCCGGTGC CGCGTGAGCA GGCGCTCGAC
CCCGGTGTCC ATGACCGGGT GCTCGCCGAG GCGCTGCGCC GCGCCGAGGC GGGTGGGCTG
CGCGGGAAGG CCGTCACGCC GTTCCTGCTG GAGACCTTCC GCACCGAGAC CGCCGGCGCG
AGCCTGGAAG TGAATGTCGC CGTAGTACGG AGCAATGTGG CGGTCGCGGC CGAGATCGCG
ACCGCCTGGG CCGCCGGCTG A
 
Protein sequence
MISPGPGLAV SAEVSAALAA GRPVVALEST LIAHGLPRPR NRAVAVELEE MLRERGVTPA 
TVAVIDGVPT IGLDDATLSR VADDPAVAKA SVRDLPAAAA LRRTCATTVA STSMLAARAG
IRVFATGGLG GVHRGAGESF DESADLPTLG GTPITVVSAG VKSILDVGAT LERMETLGIT
LLGWRTSEFP GFYLPGSGHR LDWRVDDARQ VAGTMAARDR LGLTSAIVVA NPVPREQALD
PGVHDRVLAE ALRRAEAGGL RGKAVTPFLL ETFRTETAGA SLEVNVAVVR SNVAVAAEIA
TAWAAG