| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0215 |
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| Symbol | |
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| ID | 5668640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 262173 |
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| End bp | 262856 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641239144 |
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| Product | transglycosylase domain-containing protein |
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| Protein accession | YP_001504588 |
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| Protein GI | 158312080 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.324911 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCGACG CACGTACCAG TGGCCGACAA CGCCGCAGCA GTACCCGCAG CCGGGCCCGC
ACTCTCGTCT CCGTCCCCGT CATCGCCGCG GCGGTCGGCG GAACACTCGC CCTGAGCCAG
CCGGCCAACG CCGCCACGAC CTGGGAAGGT CTGCGGCAAT GCGAGTCCGG CGGTAACTAC
ACGACGAACA CCGGTAACGG CTACTATGGC GCTTACCAGT TCTCGCCAGG CACCTGGCGC
AGCCTCGGCT ACTCGGGGCT GCCACACACG GCTCCGCCCG CCGTGCAGGA CACAGCGGCA
CTGCAACTCG CACTCCGTTC CGGGTTCGGC CAGTGGCCGG TCTGCGGGAG CGGAATGGGC
TCCGAGCAGC TCCTGCCCGG CGCGTCGTCA TCAGGCGCCG GGGTCCAGGC GTCCAGAGCG
GCCGAGCGCA CCTCGCTGGT CGCCCAGCCC GCAGCCGCGG GCGTCCCGAA CCTGACACGG
ACATACACCG CGTCGATGGT CAACCAGGTC AGCGACGAAA TCCGCTCCTG GCAGGCCAAG
ATGACCTCCC TCGGCTACCC CCTCACGGTC GACGGCAGCT ACGGACCACG GTCCGCGGCC
GCGGCGCGTG ACTTCCAGGC CGCACGCGGC CTCGTGGTGG ACGGCGTCCT GGGTCCGCAG
ACCTGGGCGG CCACCTTCGG CTGA
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| Protein sequence | MSDARTSGRQ RRSSTRSRAR TLVSVPVIAA AVGGTLALSQ PANAATTWEG LRQCESGGNY
TTNTGNGYYG AYQFSPGTWR SLGYSGLPHT APPAVQDTAA LQLALRSGFG QWPVCGSGMG
SEQLLPGASS SGAGVQASRA AERTSLVAQP AAAGVPNLTR TYTASMVNQV SDEIRSWQAK
MTSLGYPLTV DGSYGPRSAA AARDFQAARG LVVDGVLGPQ TWAATFG
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