Gene Franean1_0211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0211 
Symbol 
ID5668636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp257313 
End bp258596 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content69% 
IMG OID641239140 
Productadenylosuccinate synthetase 
Protein accessionYP_001504584 
Protein GI158312076 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0104] Adenylosuccinate synthase 
TIGRFAM ID[TIGR00184] adenylosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.398163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGCAC TAGTCCTCAT CGGCGCCCAG TGGGGCGACG AGGGAAAAGG AAAGGCGACC 
GACCTCCTGG GCGGCGCCGT CGACTACGTC GTCCGCTACC AGGGTGGCAA CAACGCCGGA
CACACGGTGG TGATCGGTGC GGAGAGTTAC GCCCTGCACC TGATTCCGTC CGGTGTGCTC
CGCACCGACT GCGTTCCGGT GATCGGTAAC GGCGTCGTGA TCGACCCCGG TGTGCTGCTC
TCGGAGATGG ATGGCCTACA GGCCCGCGGA GTCGACGTCT CCCGTCTGCT CATCAGCGCG
GACGCCCATC TGATCATGCC GCACCACCGC GCCCTGGACA GGGTCACCGA GCGGTACCTG
GGCAAGGCCC GGATCGGCAC GACGGGCCGG GGCATCGGCC CTGCGTACGG GGACAAAGTC
GCCCGCACCG GCATCCGGGT GCAGGACCTG CTCGACCCCG GCATCTTCCG GCAGAAGCTG
GAGCTGGCGC TACGGGAGAA GAACCAGGTC CTGACCAAGG TCTACAACCG GCGGCGCATC
GAGGTCGACG AGGTCGTCGA GGAGTACGCC GCCTACGCCG AGCGGCTGAC CCCGCACATC
GCCGACACCG GCCTGCTCCT CGACACCGCC CTGCGCGAGG GCAAGGTCGT CCTCCTCGAG
GGCTCCCAGG GCACCCTCCT GGACGTCGAC CACGGCACGT ATCCGTTTGT GACCTCCTCG
AACCCGACCG CCGGCTACGC CGCGACCGGC GCCGGCATCG GCCCCACCCG CATCAACCGG
GTGATCGGGA TCATCAAGGC GTACACGACC CGGGTCGGCG CCGGCCCGTT CCCGACCGAG
CTCGACGACA AGGTCGGCGA GGAGCTGCGC CGCATCGGCG GAGAATTCGG GGTCACCACC
GGCCGGGCCA GGCGCACCGG CTGGTTCGAC GCGGTCATCG CCCGCTACGC AGTCCGGGTG
AACGGCCTCA CCGACCTTTT CCTCACCAAA CTCGACGTAC TTTCCGGCTT CGACACGGTG
CCGGTCTGCG TGGGCTACGA GATCAACGGT CAGCGCACCG ATGAGATGCC GATGACGCAG
ACGGAGTTCC ACCACGCGAA ACCGATCTAC GTCGAGCTGC CTGGGTGGCA CGAGGACATC
TCGGGTGTCA CCCGGTTCGC CGATCTCCCC GAGGCCGCCC AGGCGTATGT GGCGACACTC
GAGGAGATGG CGGGCGCCCC GGTGTCGGCG GTCGGGGTGG GCCCCGGCCG CGCCCAGACC
CTGGTGATCA ACGAACTGAT CTGA
 
Protein sequence
MPALVLIGAQ WGDEGKGKAT DLLGGAVDYV VRYQGGNNAG HTVVIGAESY ALHLIPSGVL 
RTDCVPVIGN GVVIDPGVLL SEMDGLQARG VDVSRLLISA DAHLIMPHHR ALDRVTERYL
GKARIGTTGR GIGPAYGDKV ARTGIRVQDL LDPGIFRQKL ELALREKNQV LTKVYNRRRI
EVDEVVEEYA AYAERLTPHI ADTGLLLDTA LREGKVVLLE GSQGTLLDVD HGTYPFVTSS
NPTAGYAATG AGIGPTRINR VIGIIKAYTT RVGAGPFPTE LDDKVGEELR RIGGEFGVTT
GRARRTGWFD AVIARYAVRV NGLTDLFLTK LDVLSGFDTV PVCVGYEING QRTDEMPMTQ
TEFHHAKPIY VELPGWHEDI SGVTRFADLP EAAQAYVATL EEMAGAPVSA VGVGPGRAQT
LVINELI